SMTL ID : 9v8d.1

PPARgamma ligand-binding domain in complex with PG08

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.44 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 4 residues within 4Å: Chain A: Q.208, L.212, L.234, T.238 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:L.234, A:T.238 Water bridges: A:Q.208, A:Q.208

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.2: 5 residues within 4Å: Chain A: H.15, D.18, S.19, K.22, S.100 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.22, A:S.100

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 2 residues within 4Å: Chain A: A.11, L.12 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sigal, M. et al., De Novo Discovery of alpha , alpha-Disubstituted alpha-amino Acid-Containing alpha-helical Peptides as Competitive PPAR gamma PPI Inhibitors. J.Am.Chem.Soc. (2025)

Release Date

2025-11-05

Peptides

Peroxisome proliferator-activated receptor gamma: A
PG08: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

PG08

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