SMTL ID : 3hba.1

Crystal structure of a putative phosphosugar isomerase (sden_2705) from shewanella denitrificans os217 at 2.00 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 13 residues within 4Å: Chain A: Y.62, R.212, G.213, Y.216, S.238, A.240, E.241 Chain B: G.51, S.52, S.53, A.76, P.77, S.78 12 PLIP interactions: 4 interactions with chain B, 8 interactions with chain A Hydrogen bonds: B:S.52, B:S.53, B:S.78, B:S.78, A:Y.62, A:Y.62, A:G.213, A:E.241 Hydrophobic interactions: A:Y.216, A:E.241 Salt bridges: A:R.212, A:R.212 CIT.3: 12 residues within 4Å: Chain A: G.51, S.52, A.76, P.77, S.78 Chain B: Y.62, R.212, G.213, Y.216, S.238, A.240, E.241 16 PLIP interactions: 9 interactions with chain B, 7 interactions with chain A Hydrophobic interactions: B:Y.216, B:E.241 Hydrogen bonds: B:Y.62, B:Y.62, B:G.213, B:S.238, B:E.241, A:S.52, A:S.78, A:S.78, A:S.78, A:S.78 Salt bridges: B:R.212, B:R.212 Water bridges: A:S.53, A:D.105

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: P.16, Q.17, P.183, Q.184, Q.187 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.17

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of Putative phosphosugar isomerase (YP_563707.1) from SHEWANELLA DENITRIFICANS OS-217 at 2.00 A resolution. To be published

Release Date

2009-05-19

Peptides

Putative phosphosugar isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Putative phosphosugar isomerase