SMTL ID : 7dyc.3 (2 other biounits)

Crystal structure of the chemically synthesized mk2h_deltaMILPYS peptide homodimer in complex with malate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x LMR: (2S)-2-hydroxybutanedioic acid(Covalent)

LMR.1: 5 residues within 4Å: Chain A: D.28, K.29, R.32 Chain B: E.14, A.15 9 PLIP interactions: 3 interactions with chain B, 6 interactions with chain A Hydrogen bonds: B:A.15, B:A.15, A:K.29, A:K.29 Water bridges: B:E.14 Salt bridges: A:K.29, A:K.29, A:R.32, A:R.32 LMR.2: 5 residues within 4Å: Chain A: E.14, A.15 Chain B: D.28, K.29, R.32 8 PLIP interactions: 6 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:K.29, B:K.29, A:A.15, A:A.15 Salt bridges: B:K.29, B:K.29, B:R.32, B:R.32

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yagi, S. et al., Seven Amino Acid Types Suffice to Create the Core Fold of RNA Polymerase. J.Am.Chem.Soc. (2021)

Release Date

2021-09-29

Peptides

mk2h_deltaMILPYS protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
C

mk2h_deltaMILPYS protein

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