UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
---|---|---|---|---|
Q9AAW1 (METE_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme; | |
Q9A502 (METN_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Methionine import ATP-binding protein MetN; | |
Q9AAS1 (METXA_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Homoserine O-acetyltransferase; Homoserine transacetylase; | |
Q9A6J5 (MIAA_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | tRNA dimethylallyltransferase; Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Isopentenyl-diphosphate:tRNA isopentenyltransferase; | |
Q9A710 (MMPA_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Metalloprotease MmpA; Membrane metalloprotease A; | |
P58074 (MNMA_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | tRNA-specific 2-thiouridylase MnmA; | |
Q9AA58 (MNMC_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; tRNA (mnm(5)s(2)U34)-methyltransferase; 2.1.1.61; FAD-dependent cmnm(5)s(2)U34 oxidoreductase; 1.5.-.-; | |
P0CAX2 (MNME_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | tRNA modification GTPase MnmE; | |
P0CAV0 (MNMG_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; Glucose-inhibited division protein A; | |
Q9AC48 (MOAA_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | GTP 3',8-cyclase; Molybdenum cofactor biosynthesis protein A; | |
Q9AC52 (MOAC_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Cyclic pyranopterin monophosphate synthase; Molybdenum cofactor biosynthesis protein C; | |
Q9AC50 (MOAE_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Molybdopterin synthase catalytic subunit; MPT synthase subunit 2; Molybdenum cofactor biosynthesis protein E; Molybdopterin-converting factor large subunit; Molybdopterin-converting factor subunit 2; | |
Q9A594 (MRAZ_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Transcriptional regulator MraZ; | |
Q9A2H6 (MSCL_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Large-conductance mechanosensitive channel; | |
Q9A9I6 (MSRA1_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Peptide methionine sulfoxide reductase MsrA 1; Peptide-methionine (S)-S-oxide reductase 1; | |
Q9A9E9 (MSRA2_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Peptide methionine sulfoxide reductase MsrA 2; Peptide-methionine (S)-S-oxide reductase 2; | |
Q9A6B1 (MSRB_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Peptide methionine sulfoxide reductase MsrB; Peptide-methionine (R)-S-oxide reductase; | |
Q9A4T2 (MSRP_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Protein-methionine-sulfoxide reductase catalytic subunit MsrP; | |
Q9A4T3 (MSRQ_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ; Flavocytochrome MsrQ; | |
Q9ABA6 (MTGA_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Biosynthetic peptidoglycan transglycosylase; Glycan polymerase; Peptidoglycan glycosyltransferase MtgA; | |
Q9A5U7 (MURA_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Enoylpyruvate transferase; UDP-N-acetylglucosamine enolpyruvyl transferase; | |
Q9A5A7 (MURB_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylmuramate dehydrogenase; | |
Q9A5A6 (MURC_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | UDP-N-acetylmuramate--L-alanine ligase; UDP-N-acetylmuramoyl-L-alanine synthetase; | |
Q9A597 (MURD_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | UDP-N-acetylmuramoylalanine--D-glutamate ligase; D-glutamic acid-adding enzyme; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; | |
Q9A595 (MURE_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; Meso-A2pm-adding enzyme; Meso-diaminopimelate-adding enzyme; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; UDP-MurNAc-tripeptide synthetase; UDP-N-acetylmuramyl-tripeptide synthetase; | |
Q9A5A1 (MURG_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; | |
Q9A2M1 (MURU_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | N-acetylmuramate alpha-1-phosphate uridylyltransferase; | |
P0CAV5 (MUTL_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | DNA mismatch repair protein MutL; | |
Q9AC54 (MUTS_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | DNA mismatch repair protein MutS; | |
Q9A4C4 (NADA_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Quinolinate synthase; | |
Q9A4C3 (NADB_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | L-aspartate oxidase; Quinolinate synthase B; | |
P58056 (NADK_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | NAD kinase; ATP-dependent NAD kinase; | |
P0CAU4 (DNAA_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Chromosomal replication initiator protein DnaA; | |
Q9A3J3 (DNAE2_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Error-prone DNA polymerase; | |
P22305 (DNAJ_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Chaperone protein DnaJ; | |
P20442 (DNAK_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Chaperone protein DnaK; HSP70; Heat shock 70 kDa protein; Heat shock protein 70; | |
Q9A842 (DNLJ_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | DNA ligase; Polydeoxyribonucleotide synthase [NAD(+)]; | |
Q9A700 (DPO3A_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | DNA polymerase III subunit alpha; | |
P0CAU5 (DPO3B_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Beta sliding clamp; Beta-clamp processivity factor; DNA polymerase III beta sliding clamp subunit; DNA polymerase III subunit beta; | |
Q9A5I1 (DPO4_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | DNA polymerase IV; | |
Q9A253 (DUT_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Deoxyuridine 5'-triphosphate nucleotidohydrolase; dUTP pyrophosphatase; | |
Q9A709 (DXR_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxyxylulose-5-phosphate reductoisomerase; 2-C-methyl-D-erythritol 4-phosphate synthase; | |
Q9A6M5 (DXS_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxyxylulose-5-phosphate synthase; | |
Q9A3K4 (EFG_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Elongation factor G; | |
Q9AA85 (EFP_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Elongation factor P; | |
Q9A704 (EFTS_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Elongation factor Ts; | |
Q99QM0 (EFTU_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Elongation factor Tu; | |
Q9ZG89 (ENGB_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | GTP-binding protein EngB; GTP-binding protein CgpA; | |
Q9A7J9 (ENO_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | Enolase; 2-phospho-D-glycerate hydro-lyase; 2-phosphoglycerate dehydratase; | |
P58071 (ERA_CAUVC) | Swiss-Prot | Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15(Caulobacter crescentus) | GTPase Era; |
Caulobacter vibrioides is a Gram-negative, oligotrophic bacterium widely distributed in freshwater lakes and streams. Caulobacter daughter cells have two very different forms. One daughter is a mobile "swarmer" cell that has a single flagellum at one cell pole that provides swimming motility for chemotaxis. The other daughter, called the "stalked" cell has a tubular stalk structure protruding from one pole that has an adhesive holdfast material on its end, with which the stalked cell can adhere to surfaces. Swarmer cells differentiate into stalked cells after a short period of motility. Chromosome replication and cell division only occurs in the stalked cell stage. Its name derives from its crescent shape caused by the protein Crescentin.
C. vibrioides is an important model organism for studying the regulation of the cell cycle, asymmetric cell division, and cellular differentiation. Its use as a model originated with developmental biologist Lucy Shapiro.
From left to right: i) The number of proteins in the reference proteome of Caulobacter vibrioides, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Caulobacter vibrioides for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Caulobacter vibrioides, please visit UniProtKB.
You can easily download the latest protein sequences for Caulobacter vibrioides proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_02 that was used for the most up to date SWISS-MODEL Repository.
Proteins in proteome | Sequences modelled | Models |
3,720 | 2,990 | 5,152 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Caulobacter vibrioides reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Caulobacter vibrioides proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 12-mer | 14-mer | 15-mer | 16-mer | 20-mer | 24-mer | 25-mer | 26-mer | 34-mer | 36-mer | 37-mer | 38-mer | 40-mer | 42-mer | 60-mer |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
2,950 | 1,560 | 115 | 306 | 12 | 100 | 6 | 40 | 2 | 15 | 16 | 2 | 1 | 1 | 3 | 10 | 1 | 2 | 1 | 1 | 3 | 2 | 1 | 1 | 1 |