UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
---|---|---|---|---|
O14119 (BSCLH_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Seipin homolog; | |
O94516 (PEX16_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Peroxisomal membrane protein PEX16; | |
P87056 (YDJ8_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Abhydrolase domain-containing protein C57A10.08c; | |
O14307 (TRM61_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trm61; tRNA(m1A58)-methyltransferase subunit trm61; | |
O94611 (MUG65_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Meiotically up-regulated gene 65 protein; | |
O13872 (VPS28_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Vacuolar protein sorting-associated protein 28 homolog; ESCRT-I complex subunit vps28; | |
Q9USS9 (DNI2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Delayed minus-nitrogen induction protein 2; | |
Q9P3W2 (HSV2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | SVP1-like protein 2; | |
Q09682 (PSA3_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Probable proteasome subunit alpha type-3; | |
Q09686 (YA14_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Putative glutamine amidotransferase-like protein C13C5.04; | |
P21534 (COX2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Cytochrome c oxidase subunit 2; Cytochrome c oxidase polypeptide II; | |
O43033 (YGU4_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized methyltransferase C3B9.04, mitochondrial; | |
Q9HDW9 (GPI12_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase; | |
O43009 (MU110_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Meiotically up-regulated gene 110 protein; | |
O74386 (TR141_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | tRNA N(3)-methylcytidine methyltransferase trm141; | |
O74648 (IAH1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Isoamyl acetate-hydrolyzing esterase; | |
O14179 (SDO1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Ribosome maturation protein sdo1; | |
Q9Y7K9 (YGI7_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | PARP-type zinc finger-containing protein C2A9.07c; | |
O13827 (YEEB_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized protein C19A8.11c; | |
Q9P6I7 (ADE_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Adenine deaminase; Adenine aminohydrolase; | |
O74769 (BHD1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Folliculin-like protein bhd1; | |
O42906 (GPN1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | GPN-loop GTPase 1; | |
O43120 (UAP2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Splicing factor U2AF-associated protein 2; Cold sensitive U2 snRNA suppressor 2 homolog; | |
O74871 (YCW3_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized protein C31H12.03c; | |
Q9P7X3 (FRG1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Protein frg1; | |
O94579 (PSA2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Probable proteasome subunit alpha type-2; | |
Q9UTH1 (TRM13_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | tRNA:m(4)X modification enzyme TRM13; tRNA methylase 13; | |
O94409 (WTF23_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Meiotic driver wtf23; | |
Q9UT53 (NMAH_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Nicotinamide/nicotinic acid mononucleotide adenylyltransferase; Nicotinamide-nucleotide adenylyltransferase; Nicotinate-nucleotide adenylyltransferase; | |
Q10203 (YBX5_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized protein C17D1.05; | |
Q09694 (LYS1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Lysine--2-oxoglutarate reductase; | |
P31397 (MAP3_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Pheromone M-factor receptor; | |
Q09874 (YAGB_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized protein C12G12.11c; | |
Q9UTI6 (ECT1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Probable ethanolamine-phosphate cytidylyltransferase; CTP:phosphoethanolamine cytidylyltransferase; Phosphorylethanolamine transferase; | |
O14045 (TPT1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Putative tRNA 2'-phosphotransferase; | |
Q7LKX0 (ELOH2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Putative fatty acid elongase 2; 3-keto acyl-CoA synthase SPAC1639.01c; Putative elongation of fatty acids protein 2; Very-long-chain 3-oxoacyl-CoA synthase 2; | |
P40235 (HHP1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Casein kinase I homolog hhp1; | |
P78814 (SRP2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Pre-mRNA-splicing factor srp2; | |
Q9HDU4 (YHEB_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized protein PB2B2.11; | |
P36601 (RAD51_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | DNA repair protein rhp51; RAD51 homolog; | |
O94621 (US109_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | U1 snRNP-associated protein usp109; | |
Q9P7S4 (TAF4_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Transcription initiation factor TFIID subunit 4; TBP-associated factor 4; | |
O59806 (YJV8_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized N-acetyltransferase C550.08; | |
Q9UT40 (YIQ3_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized protein C824.03c, mitochondrial; | |
O14222 (FSV1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Syntaxin-like protein fsv1; | |
Q9P7U1 (YI7F_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized AIM2 family protein C977.15; | |
Q9UT97 (PSA5_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Probable proteasome subunit alpha type-5; | |
Q9HDT8 (YJ51_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | UPF0612 protein P20C8.01c; | |
Q9Y7K0 (YGL3_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | UPF0659 protein C216.03; | |
O13767 (YE95_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized protein C17A5.05c; |
Schizosaccharomyces pombe, also called "fission yeast", is a species of yeast used in traditional brewing and as a model organism in molecular and cell biology. It is a unicellular eukaryote, whose cells are rod-shaped. Cells typically measure 3 to 4 micrometres in diameter and 7 to 14 micrometres in length. Its genome, which is approximately 14.1 million base pairs, is estimated to contain 4,970 protein-coding genes and at least 450 non-coding RNAs.
"Schizosaccharomyces pombe", Wikipedia: The Free Encyclopedia
From left to right: i) The number of proteins in the reference proteome of Schizosaccharomyces pombe, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Schizosaccharomyces pombe for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Schizosaccharomyces pombe, please visit UniProtKB, or from PomBase.
You can easily download the latest protein sequences for Schizosaccharomyces pombe proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2024_03 that was used for the most up to date SWISS-MODEL Repository.
Proteins in proteome | Sequences modelled | Models |
5,117 | 4,207 | 7,945 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Schizosaccharomyces pombe reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Schizosaccharomyces pombe proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 11-mer | 12-mer | 14-mer | 16-mer | 18-mer | 24-mer | 26-mer | 36-mer | 40-mer | 60-mer |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6,812 | 789 | 53 | 168 | 6 | 60 | 6 | 13 | 1 | 7 | 3 | 10 | 2 | 3 | 1 | 5 | 1 | 1 | 2 | 2 |