Filter results by: Taxon Proteome
1 - 50 of 6742 UniProtKB matches
(9030 models, 27260 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
P35191
(MDJ1_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
DnaJ homolog 1, mitochondrial;
P42834
(MDJ2_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mitochondrial DnaJ homolog 2;
P33310
(MDL1_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
ATP-dependent permease MDL1, mitochondrial;
ABC transporter MDL1;
Multidrug resistance-like protein 1;
P33311
(MDL2_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
ATP-dependent permease MDL2, mitochondrial;
Multidrug resistance-like protein 2;
P18409
(MDM10_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mitochondrial distribution and morphology protein 10;
Mitochondrial inheritance component MDM10;
Q92328
(MDM12_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mitochondrial distribution and morphology protein 12;
Mitochondrial inheritance component MDM12;
Q01846
(MDM1_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Structural protein MDM1;
Mitochondrial distribution and morphology protein 1;
Q05930
(MDM30_YEAST)
Swiss-ProtSaccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mitochondrial distribution and morphology protein 30;
P38880
(MDM31_YEAST)
Swiss-ProtSaccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mitochondrial distribution and morphology protein 31;
Q12171
(MDM32_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mitochondrial distribution and morphology protein 32;
P53083
(MDM34_YEAST)
Swiss-ProtSaccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mitochondrial distribution and morphology protein 34;
Mitochondrial outer membrane protein MMM2;
O60200
(MDM35_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mitochondrial distribution and morphology protein 35;
Q06820
(MDM36_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mitochondrial distribution and morphology protein 36;
Q08179
(MDM38_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mitochondrial distribution and morphology protein 38;
Q12019
(MDN1_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Midasin;
Dynein-related AAA-ATPase REA1;
MIDAS-containing protein;
Ribosome export/assembly protein 1;
P53094
(MDS3_YEAST)
Swiss-ProtSaccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Negative regulator of sporulation MDS3;
MCK1 dosage suppressor 3;
P47025
(MDV1_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mitochondrial division protein 1;
Mitochondria fission 2 protein;
Q12285
(MDY2_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Ubiquitin-like protein MDY2;
Golgi to ER traffic protein 5;
Mating-deficient protein 2;
Translation machinery-associated protein 24;
Q02574
(MEC3_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
DNA damage checkpoint control protein MEC3;
Q06213
(MED10_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 10;
Mediator complex subunit 10;
Negative regulator of URS2 protein 2;
Q99278
(MED11_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 11;
Mediator complex subunit 11;
P19263
(MED14_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 14;
Glucose repression regulatory protein 1;
Mediator complex subunit 14;
P19659
(MED15_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 15;
Autonomous replication regulatory protein 3;
Basal expression activator protein 1;
Defective silencing suppressor protein 4;
Mediator complex subunit 15;
Transcription regulatory protein GAL11;
Ty insertion suppressor protein 13;
P32259
(MED16_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 16;
Global transcriptional regulator SIN4;
Mediator complex subunit 16;
SNF1 suppressor protein 4;
SWI4 suppressor protein 5;
Transcriptional silencing factor 3;
YGP1 expression regulatory protein 1;
P32569
(MED17_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 17;
Mediator complex subunit 17;
Suppressor of RNA polymerase B 4;
P32585
(MED18_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 18;
Mediator complex subunit 18;
Suppressor of RNA polymerase B 5;
P25046
(MED19_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 19;
Hypoxic gene repressor protein 3;
Mediator complex subunit 19;
Negative regulator of URS2 protein 3;
SNF1 suppressor protein 7;
Q12321
(MED1_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 1;
Mediator complex subunit 1;
P34162
(MED20_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 20;
Hyper-recombination suppressor protein 2;
Mediator complex subunit 20;
Suppressor of RNA polymerase B 2;
P47822
(MED21_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 21;
Mediator complex subunit 21;
RNAPII complex component SRB7;
Suppressor of RNA polymerase B 7;
P32570
(MED22_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 22;
Mediator complex subunit 22;
Suppressor of RNA polymerase B 6;
Q12124
(MED2_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 2;
Mediator complex subunit 2;
P38633
(MED31_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 31;
Hpr1 suppressor protein 1;
Mediator complex subunit 31;
P40356
(MED3_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 3;
Hyper-recombination suppressor protein 1;
Mediator complex subunit 3;
Poly-glutamine domain protein 1;
Q12343
(MED4_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 4;
Mediator complex subunit 4;
P53114
(MED5_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 5;
Mediator complex subunit 5;
Negative regulator of URS2 protein 1;
P38782
(MED6_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 6;
Mediator complex subunit 6;
Q08278
(MED7_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 7;
Mediator complex subunit 7;
P38304
(MED8_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 8;
Mediator complex subunit 8;
P33308
(MED9_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Mediator of RNA polymerase II transcription subunit 9;
Chromosome segregation protein 2;
Mediator complex subunit 9;
Q02205
(MEH1_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Protein MEH1;
EGO complex subunit 1;
GSE complex subunit 2;
P29467
(MEI4_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Meiosis-specific protein MEI4;
P32489
(MEI5_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Meiosis protein 5;
P24719
(MEK1_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Meiosis-specific serine/threonine-protein kinase MEK1;
P40260
(MEP1_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Ammonium transporter MEP1;
P41948
(MEP2_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Ammonium transporter MEP2;
P53390
(MEP3_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Ammonium transporter MEP3;
P16523
(MER1_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Meiotic recombination 1 protein;
P39692
(MET10_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Sulfite reductase [NADPH] flavoprotein component;
P25583
(MET14_YEAST)
Swiss-Prot
Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)
Karyogamy protein KAR4;
1 - 50 of 6742
Saccharomyces cerevisiae (ATCC 204508 / S288c) (Baker's yeast)

Saccharomyces cerevisiae is a species of yeast. The cells are round to ovoid and 5–10 μm in diameter. It reproduces by a division process known as budding. S. cerevisiae has been instrumental to winemaking, baking, and brewing since ancient times. It is believed to have been originally isolated from the skin of grapes.

S. cerevisiae is one of the most intensively studied eukaryotic model organisms in molecular and cell biology, among others for senescence, meiosis, recombination and DNA repair. Many proteins important in human biology were first discovered by studying their homologs in yeast.

The genome of S. cerevisiae was first sequenced in 1996.

"Saccharomyces cerevisiae", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Saccharomyces cerevisiae, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Saccharomyces cerevisiae for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Saccharomyces cerevisiae, please visit UniProtKB.

You can easily download the latest protein sequences for Saccharomyces cerevisiae proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_02 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
6,0654,7318,907

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Saccharomyces cerevisiae reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Saccharomyces cerevisiae proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer11-mer12-mer14-mer24-mer32-mer40-mer62-mer
7,5289575120210915281821144122
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