Filter results by: Taxon Proteome
1 - 50 of 27444 UniProtKB matches
(34333 models, 672 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
Q94131
(PIE1_CAEEL)
Swiss-ProtCaenorhabditis elegansPharynx and intestine in excess protein 1;
O61742
(PSMD4_CAEEL)
Swiss-Prot
Caenorhabditis elegans26S proteasome non-ATPase regulatory subunit 4;
26S proteasome regulatory subunit rpn-10;
Q9U2C9
(TBX37_CAEEL)
Swiss-Prot
Caenorhabditis elegansT-box protein 37;
Q20405
(SRA10_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class alpha-10;
O17847
(SRA25_CAEEL)
Swiss-ProtCaenorhabditis elegansSerpentine receptor class alpha-25;
Q09217
(YP68_CAEEL)
Swiss-Prot
Caenorhabditis elegansLUC7-related splicing factor homolog;
Q23120
(RSP2_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable splicing factor, arginine/serine-rich 2;
CeSRp40;
RNA-binding protein srp-4;
Q9XXD4
(NHP2_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative H/ACA ribonucleoprotein complex subunit 2-like protein;
P34383
(FAR2_CAEEL)
Swiss-Prot
Caenorhabditis elegansFatty-acid and retinol-binding protein 2;
Q19013
(GLS2_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative glutaminase 2;
L-glutamine amidohydrolase;
Q9U7D5
(ACM3_CAEEL)
Swiss-Prot
Caenorhabditis elegansMuscarinic acetylcholine receptor gar-3;
G-protein-linked acetylcholine receptor 3;
G5EDE9
(NFKI1_CAEEL)
Swiss-Prot
Caenorhabditis elegansANK repeat-containing protein nipk-1;
Q18299
(NHR43_CAEEL)
Swiss-ProtCaenorhabditis elegansNuclear hormone receptor family member nhr-43;
Q20191
(NAS13_CAEEL)
Swiss-Prot
Caenorhabditis elegansZinc metalloproteinase nas-13;
Nematode astacin 13;
Q17528
(BEST1_CAEEL)
Swiss-Prot
Caenorhabditis elegansBestrophin homolog 1;
P34273
(IYD1H_CAEEL)
Swiss-Prot
Caenorhabditis elegansIodotyrosine dehalogenase 1 homolog;
Q09343
(YR27_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein W02B3.7;
P34444
(YL86_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein F54C8.6;
O02485
(YDJ1_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein ZK1073.1;
Q09376
(TBX35_CAEEL)
Swiss-Prot
Caenorhabditis elegansT-box transcription factor tbx-35;
Q20848
(P5CR4_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative pyrroline-5-carboxylate reductase 4;
Q19157
(PIN2_CAEEL)
Swiss-Prot
Caenorhabditis elegansLIM domain-containing protein pin-2;
Q9U6P6
(RNH2A_CAEEL)
Swiss-Prot
Caenorhabditis elegansRibonuclease H2 subunit A;
RNase H(35);
Ribonuclease HI large subunit;
Ribonuclease HI subunit A;
Q09581
(LEC3_CAEEL)
Swiss-Prot
Caenorhabditis elegans32 kDa beta-galactoside-binding lectin lec-3;
32 kDa GBP;
Q93591
(YUBO_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein F26A3.7;
Q09246
(YP98_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein C28H8.8;
Q9N3F0
(RPF2_CAEEL)
Swiss-Prot
Caenorhabditis elegansRibosome production factor 2 homolog;
Brix domain-containing protein 1 homolog;
Ribosome biogenesis protein RPF2 homolog;
Q9U1W2
(MED8_CAEEL)
Swiss-Prot
Caenorhabditis elegansMediator of RNA polymerase II transcription subunit 8;
Mediator complex subunit 8;
P45964
(YNZ4_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein T09A5.4;
Q9BLC4
(SDZ12_CAEEL)
Swiss-ProtCaenorhabditis elegansZinc finger protein sdz-12;
Skn-1-dependent zygotic transcript 12 protein;
F5GUE5
(DAF14_CAEEL)
Swiss-Prot
Caenorhabditis elegansSmad-related protein daf-14;
Abnormal dauer formation protein 14;
Q09248
(DCTN2_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable dynactin subunit 2;
Q23622
(TBX36_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative T-box protein 36;
Q5FC79
(SFXN5_CAEEL)
Swiss-ProtCaenorhabditis elegansSideroflexin-5;
Q09203
(SRA1_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class alpha-1;
Q09370
(YS41_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein ZK177.1;
Q09212
(SRA9_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class alpha-9;
Q8WTM6
(ARPC2_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable actin-related protein 2/3 complex subunit 2;
Arp2/3 complex 34 kDa subunit;
G5EFQ5
(RUNX1_CAEEL)
Swiss-Prot
Caenorhabditis elegansRunt-related transcription factor rnt-1;
Q03568
(YLD3_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein C38C10.3;
Q9XXS1
(LYS3_CAEEL)
Swiss-Prot
Caenorhabditis elegansLysozyme-like protein 3;
Q9N2W5
(UBXN2_CAEEL)
Swiss-Prot
Caenorhabditis elegansUBX domain-containing protein 2;
P45969
(SDS22_CAEEL)
Swiss-Prot
Caenorhabditis elegansProtein phosphatase 1 regulatory subunit SDS22 homolog;
Q10045
(UNC50_CAEEL)
Swiss-ProtCaenorhabditis elegansProtein unc-50;
Uncoordinated protein 50;
Q18090
(TOM40_CAEEL)
Swiss-Prot
Caenorhabditis elegansMitochondrial import receptor subunit TOM40 homolog;
Translocase of outer membrane 40 kDa subunit homolog;
P08124
(COL1_CAEEL)
Swiss-Prot
Caenorhabditis elegansCuticle collagen 1;
Protein dumpy-15;
Protein squat-3;
P17656
(COL2_CAEEL)
Swiss-Prot
Caenorhabditis elegansCuticle collagen 2;
Q5WRN1
(TSP21_CAEEL)
Swiss-Prot
Caenorhabditis elegansTetraspanin-21;
Q20053
(AT5F1_CAEEL)
Swiss-Prot
Caenorhabditis elegansATP synthase F(0) complex subunit B1, mitochondrial;
ATP synthase peripheral stalk-membrane subunit B1;
ATP synthase proton-transporting mitochondrial F(0) complex subunit B1;
ATP synthase subunit B1;
O62259
(KLF2_CAEEL)
Swiss-Prot
Caenorhabditis elegansKruppel-like factor 2;
1 - 50 of 27444
Caenorhabditis elegans

Caenorhabditis elegans is a free-living, transparent nematode, about 1 mm in length, that lives in temperate soil environments. The name means "elegant new rod".

C. elegans is a model organism for nervous system development as well as senescence. Of interest to researchers is the phenomenon of eutely: each adult hermaphrodite has exactly 959 and each adult male exactly 1031 somatic cell nuclei

C. elegans was the first multicellular organism to have its whole genome sequenced in 1998.

"Caenorhabditis elegans", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Caenorhabditis elegans, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Caenorhabditis elegans for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Caenorhabditis elegans, please visit UniProtKB.

You can easily download the latest protein sequences for Caenorhabditis elegans proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_03 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
19,82413,22623,645

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Caenorhabditis elegans reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Caenorhabditis elegans proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer11-mer12-mer14-mer16-mer18-mer20-mer24-mer25-mer32-mer34-mer40-mer41-mer44-mer48-mer51-mer55-mer60-mer62-mer
20,7511,962158388118103739714137771111110183211141
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