Filter results by: Taxon Proteome
1 - 50 of 27444 UniProtKB matches
(34361 models, 663 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
G5ED66
(PAX3H_CAEEL)
Swiss-Prot
Caenorhabditis elegansPaired box protein 3 homolog;
P41991
(PES10_CAEEL)
Swiss-ProtCaenorhabditis elegansPatterned expression site protein 10;
O62203
(PHM2_CAEEL)
Swiss-Prot
Caenorhabditis elegansPharyngeal muscle protein 2;
F5GUE5
(DAF14_CAEEL)
Swiss-Prot
Caenorhabditis elegansSmad-related protein daf-14;
Abnormal dauer formation protein 14;
G5EEW6
(SIG7_CAEEL)
Swiss-Prot
Caenorhabditis elegansPeptidyl-prolyl cis-trans isomerase sig-7;
Cyclophilin-like protein sig-7;
Silencer in germline 7;
Q9N2K7
(TBX30_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative T-box protein 30/42;
Q22495
(TSP12_CAEEL)
Swiss-Prot
Caenorhabditis elegansTetraspanin-12;
Q9N3E2
(MAB31_CAEEL)
Swiss-ProtCaenorhabditis elegansMale abnormal protein mab-31;
P20163
(BIBH_CAEEL)
Swiss-Prot
Caenorhabditis elegansEndoplasmic reticulum chaperone BiP homolog;
Heat shock 70 kDa protein D;
O62267
(SRE30_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class epsilon-30;
P46564
(SRV1_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class V-1;
Protein srg-12;
P55113
(NAS7_CAEEL)
Swiss-Prot
Caenorhabditis elegansZinc metalloproteinase nas-7;
Nematode astacin 7;
Q04833
(LRP_CAEEL)
Swiss-Prot
Caenorhabditis elegansLow-density lipoprotein receptor-related protein;
P34515
(YMX7_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein K06H7.7;
O17204
(OSTA1_CAEEL)
Swiss-ProtCaenorhabditis elegansOrganic solute transporter alpha-like protein 1;
Solute carrier family 51 subunit alpha homolog C;
Q966C6
(RL7A_CAEEL)
Swiss-Prot
Caenorhabditis elegansLarge ribosomal subunit protein eL8;
60S ribosomal protein L7a;
Q09336
(FB224_CAEEL)
Swiss-ProtCaenorhabditis elegansF-box A protein 224;
O02305
(NH217_CAEEL)
Swiss-Prot
Caenorhabditis elegansNuclear hormone receptor family member nhr-217;
O17917
(RN113_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable E3 ubiquitin-protein ligase rnf113;
RING finger protein 113 homolog;
Q9XUM6
(BAT34_CAEEL)
Swiss-Prot
Caenorhabditis elegansBTB and MATH domain-containing protein 34;
Q18484
(TMX2_CAEEL)
Swiss-Prot
Caenorhabditis elegansThioredoxin-related transmembrane protein 2 homolog;
Thioredoxin domain-containing protein 14 homolog;
Q18006
(SOX_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative sarcosine oxidase;
Q9XTD6
(NAS12_CAEEL)
Swiss-Prot
Caenorhabditis elegansZinc metalloproteinase nas-12;
Nematode astacin 12;
P54073
(YUY1_CAEEL)
Swiss-Prot
Caenorhabditis elegansBrix domain-containing protein F44G4.1;
Q9XXU9
(VATC_CAEEL)
Swiss-Prot
Caenorhabditis elegansV-type proton ATPase subunit C;
Vacuolar proton pump subunit C;
Q17335
(ADHX_CAEEL)
Swiss-Prot
Caenorhabditis elegansAlcohol dehydrogenase class-3;
Alcohol dehydrogenase class-III;
Alcohol dehydrogenase homolog 5;
Glutathione-dependent formaldehyde dehydrogenase;
S-(hydroxymethyl)glutathione dehydrogenase;
Q09952
(YSR4_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein F59B10.4;
Q20701
(GPA5_CAEEL)
Swiss-Prot
Caenorhabditis elegansGuanine nucleotide-binding protein alpha-5 subunit;
G5EGC9
(PES1_CAEEL)
Swiss-Prot
Caenorhabditis elegansForkhead box protein pes-1;
Pattern expression site 1;
Q9XWJ1
(SMG9_CAEEL)
Swiss-Prot
Caenorhabditis elegansNonsense-mediated mRNA decay factor SMG9;
Suppressor with morphogenetic effect on genitalia protein 9;
G5EF15
(POS1_CAEEL)
Swiss-Prot
Caenorhabditis elegansRNA-binding protein pos-1;
Posterior segregation protein pos-1;
Zinc-finger protein pos-1;
Q93571
(UBC25_CAEEL)
Swiss-Prot
Caenorhabditis elegansUbiquitin-conjugating enzyme E2 25;
E2 ubiquitin-conjugating enzyme 25;
Q10664
(MEK2_CAEEL)
Swiss-Prot
Caenorhabditis elegansDual specificity mitogen-activated protein kinase kinase mek-2;
Q09341
(YR24_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein W02B3.4;
O16925
(STDH4_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative steroid dehydrogenase 4;
Q10130
(DHS5_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized oxidoreductase dhs-5;
Short-chain dehydrogenase 5;
P34350
(YK84_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein C30A5.4;
Q9U2R0
(BIN3D_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable RNA methyltransferase Y17G7B.18;
Q9XWV0
(TMM33_CAEEL)
Swiss-Prot
Caenorhabditis elegansTransmembrane protein 33 homolog;
Q22472
(RIC3_CAEEL)
Swiss-Prot
Caenorhabditis elegansResistance to inhibitors of cholinesterase protein 3;
O62461
(SELD_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable selenide, water dikinase;
Selenium donor protein;
Selenophosphate synthase 1;
Q18054
(HLH25_CAEEL)
Swiss-Prot
Caenorhabditis elegansHelix-loop-helix protein 25;
Q19872
(ATZ1_CAEEL)
Swiss-Prot
Caenorhabditis elegansProtein atz-1;
Abnormal transition zone 1;
Q10007
(HLH6_CAEEL)
Swiss-Prot
Caenorhabditis elegansHelix-loop-helix protein 6;
P34714
(SPRC_CAEEL)
Swiss-Prot
Caenorhabditis elegansSPARC;
Basement-membrane protein 40;
Osteonectin;
Secreted protein acidic and rich in cysteine;
G5EDW7
(LIN8_CAEEL)
Swiss-ProtCaenorhabditis elegansProtein lin-8;
Abnormal cell lineage protein 8;
P41844
(YO94_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized F-box protein T20B12.4;
G5EEM6
(TAB1_CAEEL)
Swiss-Prot
Caenorhabditis elegansTGF-beta-activated kinase 1 and MAP3K7-binding protein 1;
TAB1-like protein 1;
TAK1 kinase/MOM-4 binding Protein;
Q23261
(MTNB_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable methylthioribulose-1-phosphate dehydratase;
Q9U2H9
(EF1B2_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable elongation factor 1-beta/1-delta 2;
1 - 50 of 27444
Caenorhabditis elegans

Caenorhabditis elegans is a free-living, transparent nematode, about 1 mm in length, that lives in temperate soil environments. The name means "elegant new rod".

C. elegans is a model organism for nervous system development as well as senescence. Of interest to researchers is the phenomenon of eutely: each adult hermaphrodite has exactly 959 and each adult male exactly 1031 somatic cell nuclei

C. elegans was the first multicellular organism to have its whole genome sequenced in 1998.

"Caenorhabditis elegans", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Caenorhabditis elegans, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Caenorhabditis elegans for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Caenorhabditis elegans, please visit UniProtKB.

You can easily download the latest protein sequences for Caenorhabditis elegans proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_02 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
19,82413,19124,151

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Caenorhabditis elegans reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Caenorhabditis elegans proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer11-mer12-mer14-mer16-mer18-mer20-mer24-mer25-mer32-mer34-mer40-mer41-mer44-mer48-mer51-mer60-mer62-mer
21,1822,00916239712310474291413957111111418321151
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