Filter results by: Taxon Proteome
1 - 50 of 27444 UniProtKB matches
(34462 models, 671 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
P34276
(YKJ2_CAEEL)
Swiss-Prot
Caenorhabditis elegansGILT-like protein C02D5.2;
Q10924
(FKH6_CAEEL)
Swiss-Prot
Caenorhabditis elegansForkhead transcription factor fkh-6;
P52906
(UNC30_CAEEL)
Swiss-Prot
Caenorhabditis elegansHomeobox protein unc-30;
Uncoordinated protein 30;
P54127
(SRG5_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class gamma-5;
Q9N5N8
(SURF1_CAEEL)
Swiss-Prot
Caenorhabditis elegansSURF1-like protein;
Q09455
(COL39_CAEEL)
Swiss-Prot
Caenorhabditis elegansCuticle collagen 39;
P34626
(YOJ3_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein ZK353.3;
Q02333
(YOL6_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein ZK370.6;
Q688C0
(RT24_CAEEL)
Swiss-Prot
Caenorhabditis elegansSmall ribosomal subunit protein uS3m;
28S ribosomal protein S24, mitochondrial;
P34393
(CL160_CAEEL)
Swiss-Prot
Caenorhabditis elegansC-type lectin domain-containing protein 160;
A5HWA8
(EFL2_CAEEL)
Swiss-Prot
Caenorhabditis elegansTranscription factor efl-2;
E2F-like family member 2;
O01513
(IMP3_CAEEL)
Swiss-Prot
Caenorhabditis elegansU3 small nucleolar ribonucleoprotein protein imp3;
40S ribosomal protein S4-like;
Q9U239
(ZN593_CAEEL)
Swiss-Prot
Caenorhabditis elegansZinc finger protein 593 homolog;
Q21181
(NAS19_CAEEL)
Swiss-Prot
Caenorhabditis elegansZinc metalloproteinase nas-19;
Nematode astacin 19;
Q22306
(YW12_CAEEL)
Swiss-Prot
Caenorhabditis elegansUPF0046 protein T07D4.2;
Q10454
(KARG1_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable arginine kinase F46H5.3;
Q9NA56
(TBX39_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative T-box protein 39;
Q17389
(CUL1_CAEEL)
Swiss-Prot
Caenorhabditis elegansCullin-1;
Abnormal cell lineage protein 19;
Q09371
(YS42_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein ZK177.2;
Q5FC64
(ZDHCS_CAEEL)
Swiss-Prot
Caenorhabditis elegansPalmitoyltransferase spe-10;
Defective spermatogenesis protein 10;
P91529
(RPC6_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable DNA-directed RNA polymerase III subunit RPC6;
DNA-directed RNA polymerase III subunit F;
P91148
(NDX7_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative nudix hydrolase 7;
O16974
(SRG53_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class gamma-53;
Q9U3C8
(DCN1_CAEEL)
Swiss-Prot
Caenorhabditis elegansDefective in cullin neddylation protein 1;
Q23588
(UTPP_CAEEL)
Swiss-Prot
Caenorhabditis elegansUridine and thymidine phosphorylase;
Pyrimidine-nucleoside phosphorylase;
G5EFY7
(PQM1_CAEEL)
Swiss-ProtCaenorhabditis elegansZinc finger transcription factor pqm-1;
CePqM132;
Paraquat responsive protein;
Q95Q18
(LACB2_CAEEL)
Swiss-Prot
Caenorhabditis elegansBeta-lactamase-like protein 2 homolog;
Q21917
(GPA7_CAEEL)
Swiss-Prot
Caenorhabditis elegansGuanine nucleotide-binding protein alpha-7 subunit;
Q9NA75
(T38B1_CAEEL)
Swiss-Prot
Caenorhabditis elegansTrimeric intracellular cation channel type 1B.1;
TRIC-B1;
G5EGN8
(NHR27_CAEEL)
Swiss-Prot
Caenorhabditis elegansNuclear hormone receptor family member nhr-27;
O45365
(NH176_CAEEL)
Swiss-Prot
Caenorhabditis elegansNuclear hormone receptor family nhr-176;
P18834
(COL14_CAEEL)
Swiss-Prot
Caenorhabditis elegansCuticle collagen 14;
Q95ZY4
(SRB5_CAEEL)
Swiss-ProtCaenorhabditis elegansSerpentine receptor class beta-5;
Q09638
(NPR15_CAEEL)
Swiss-Prot
Caenorhabditis elegansNeuropeptide receptor 15;
P46500
(SDZ15_CAEEL)
Swiss-ProtCaenorhabditis elegansSkn-1 dependent zygotic transcript 15 protein;
Q20027
(C25HL_CAEEL)
Swiss-ProtCaenorhabditis elegansCholesterol 25-hydroxylase-like protein;
Q21187
(FKH9_CAEEL)
Swiss-Prot
Caenorhabditis elegansForkhead transcription factor fkh-9;
Q21307
(MEK1_CAEEL)
Swiss-Prot
Caenorhabditis elegansDual specificity mitogen-activated protein kinase kinase mek-1;
P17656
(COL2_CAEEL)
Swiss-Prot
Caenorhabditis elegansCuticle collagen 2;
Q8WTM6
(ARPC2_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable actin-related protein 2/3 complex subunit 2;
Arp2/3 complex 34 kDa subunit;
Q9XXS1
(LYS3_CAEEL)
Swiss-Prot
Caenorhabditis elegansLysozyme-like protein 3;
G5EFQ5
(RUNX1_CAEEL)
Swiss-Prot
Caenorhabditis elegansRunt-related transcription factor rnt-1;
Q9N2W5
(UBXN2_CAEEL)
Swiss-Prot
Caenorhabditis elegansUBX domain-containing protein 2;
Q18090
(TOM40_CAEEL)
Swiss-Prot
Caenorhabditis elegansMitochondrial import receptor subunit TOM40 homolog;
Translocase of outer membrane 40 kDa subunit homolog;
P08124
(COL1_CAEEL)
Swiss-Prot
Caenorhabditis elegansCuticle collagen 1;
Protein dumpy-15;
Protein squat-3;
Q03568
(YLD3_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein C38C10.3;
Q10045
(UNC50_CAEEL)
Swiss-ProtCaenorhabditis elegansProtein unc-50;
Uncoordinated protein 50;
Q20053
(AT5F1_CAEEL)
Swiss-Prot
Caenorhabditis elegansATP synthase F(0) complex subunit B1, mitochondrial;
ATP synthase peripheral stalk-membrane subunit B1;
ATP synthase proton-transporting mitochondrial F(0) complex subunit B1;
ATP synthase subunit B1;
Q5WRN1
(TSP21_CAEEL)
Swiss-Prot
Caenorhabditis elegansTetraspanin-21;
P34356
(RHOM2_CAEEL)
Swiss-ProtCaenorhabditis elegansInactive rhomboid-related protein 2;
1 - 50 of 27444
Caenorhabditis elegans

Caenorhabditis elegans is a free-living, transparent nematode, about 1 mm in length, that lives in temperate soil environments. The name means "elegant new rod".

C. elegans is a model organism for nervous system development as well as senescence. Of interest to researchers is the phenomenon of eutely: each adult hermaphrodite has exactly 959 and each adult male exactly 1031 somatic cell nuclei

C. elegans was the first multicellular organism to have its whole genome sequenced in 1998.

"Caenorhabditis elegans", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Caenorhabditis elegans, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Caenorhabditis elegans for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Caenorhabditis elegans, please visit UniProtKB.

You can easily download the latest protein sequences for Caenorhabditis elegans proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_02 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
19,82413,19124,151

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Caenorhabditis elegans reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Caenorhabditis elegans proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer11-mer12-mer14-mer16-mer18-mer20-mer24-mer25-mer32-mer34-mer40-mer41-mer44-mer48-mer51-mer60-mer62-mer
21,1822,00916239712310474291413957111111418321151
Download