Filter results by: Taxon Proteome
1 - 50 of 27512 UniProtKB matches
(34545 models, 714 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
P34367
(YLJ2_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein C50C3.2;
Q9TXQ1
(TNKS1_CAEEL)
Swiss-Prot
Caenorhabditis elegansPoly [ADP-ribose] polymerase tankyrase;
Poly ADP-ribose metabolism enzyme 5;
Protein poly-ADP-ribosyltransferase tankyrase;
Q18892
(EPG5_CAEEL)
Swiss-Prot
Caenorhabditis elegansEctopic P granules protein 5;
Q9BMN8
(LAR_CAEEL)
Swiss-Prot
Caenorhabditis elegansTyrosine-protein phosphatase Lar-like;
Protein-tyrosine phosphate 3;
P34369
(PRP8_CAEEL)
Swiss-Prot
Caenorhabditis elegansPre-mRNA-splicing factor 8 homolog;
G5EGK6
(DIN1_CAEEL)
Swiss-Prot
Caenorhabditis elegansDaf-12-interacting protein 1;
H2KYH3
(RING2_CAEEL)
Swiss-Prot
Caenorhabditis elegansE3 ubiquitin-protein ligase RING2 homolog spat-3;
RING domain-containing protein spat-3;
E9P860
(ZNFX1_CAEEL)
Swiss-Prot
Caenorhabditis elegansNFX1-type zinc finger-containing protein 1 homolog;
A0A061ACU2
(PIEZ1_CAEEL)
Swiss-Prot
Caenorhabditis elegansPiezo-type mechanosensitive ion channel component 1;
Q19317
(NBEA_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative neurobeachin homolog;
Suppressor enhancer of lin-12;
Q9NEL2
(SSL1_CAEEL)
Swiss-Prot
Caenorhabditis elegansHelicase ssl-1;
Swi/snf2-like protein 1;
Q8I7I5
(ROL3_CAEEL)
Swiss-Prot
Caenorhabditis elegansProtein roller-3;
Q9N3X8
(SDK_CAEEL)
Swiss-ProtCaenorhabditis elegansProtein sidekick homolog;
Neuronal IgCAM protein 4;
Q20937
(CNOT1_CAEEL)
Swiss-Prot
Caenorhabditis elegansCCR4-NOT transcription complex subunit let-711;
CCR4-associated factor let-711;
Lethal protein 711;
Negative regulator of transcription subunit 1 homolog;
O76840
(PPN1_CAEEL)
Swiss-Prot
Caenorhabditis elegansPapilin;
Abnormal cell migration protein 6;
P27715
(UNC13_CAEEL)
Swiss-Prot
Caenorhabditis elegansPhorbol ester/diacylglycerol-binding protein unc-13;
Uncoordinated protein 13;
O01510
(SMG1_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerine/threonine-protein kinase smg-1;
Suppressor with morphogenetic effect on genitalia protein 1;
Q9N3Q4
(ATM_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerine/threonine-protein kinase ATM;
A0A131MBU3
(IRG7_CAEEL)
Swiss-Prot
Caenorhabditis elegansProtein irg-7;
Infection response protein 7;
Q93971
(TRPG_CAEEL)
Swiss-Prot
Caenorhabditis elegansTransient receptor potential channel;
Abnormal gonad development protein 2;
Q18990
(PYR1_CAEEL)
Swiss-Prot
Caenorhabditis elegansMultifunctional protein pyr-1;
Glutamine-dependent carbamoyl-phosphate synthase;
6.3.5.5;
Glutamine amidotransferase;
GATase;
GLNase;
3.5.1.2;
Ammonium-dependent carbamoyl phosphate synthase;
CPS;
CPSase;
6.3.4.16;
Aspartate carbamoyltransferase;
2.1.3.2;
Dihydroorotase;
3.5.2.3;
Q95XZ5
(NIPBL_CAEEL)
Swiss-Prot
Caenorhabditis elegansNipped-B-like protein scc-2;
Prion-like-(Q/N-rich) domain-bearing protein 85;
SCC2 homolog;
Q7JM44
(SMA9_CAEEL)
Swiss-Prot
Caenorhabditis elegansTranscription factor sma-9;
Q11107
(LIN13_CAEEL)
Swiss-ProtCaenorhabditis elegansZinc finger protein lin-13;
Abnormal cell lineage protein 13;
Q21480
(ATG2_CAEEL)
Swiss-ProtCaenorhabditis elegansAutophagy-related protein 2;
Q9XW10
(PAD1_CAEEL)
Swiss-ProtCaenorhabditis elegansProtein pad-1;
Patterning defective protein 1;
Q22258
(ATR_CAEEL)
Swiss-ProtCaenorhabditis elegansSerine/threonine-protein kinase ATR;
ATM-like protein 1;
Ataxia telangiectasia and Rad3-related protein homolog;
Ce-atl-1;
G5EDK5
(CELR_CAEEL)
Swiss-Prot
Caenorhabditis elegansCadherin EGF LAG seven-pass G-type receptor fmi-1;
Protein flamingo homolog;
V6CLA2
(HECD1_CAEEL)
Swiss-Prot
Caenorhabditis elegansE3 ubiquitin-protein ligase hecd-1;
Q23551
(UNC22_CAEEL)
Swiss-Prot
Caenorhabditis elegansTwitchin;
Uncoordinated protein 22;
O01761
(UNC89_CAEEL)
Swiss-Prot
Caenorhabditis elegansMuscle M-line assembly protein unc-89;
Inactive serine/threonine-protein kinase unc-89;
Obscurin;
Uncoordinated protein 89;
Q95XZ6
(LAAT1_CAEEL)
Swiss-Prot
Caenorhabditis elegansLysosomal amino acid transporter 1;
G5EEV9
(SID2_CAEEL)
Swiss-Prot
Caenorhabditis elegansSystemic RNA interference defective protein 2;
P54128
(SRG6_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class gamma-6;
G5EFS4
(DCPS_CAEEL)
Swiss-Prot
Caenorhabditis elegansm7GpppX diphosphatase;
Decapping scavenger enzyme;
Heat shock-like protein;
Protein DCS-1;
Scavenger mRNA-decapping enzyme DcpS;
Q9XVD5
(TBX38_CAEEL)
Swiss-Prot
Caenorhabditis elegansT-box protein 38;
Q19264
(DEOC_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative deoxyribose-phosphate aldolase;
2-deoxy-D-ribose 5-phosphate aldolase;
Phosphodeoxyriboaldolase;
P34572
(YNV9_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein T16H12.9;
U4PLN7
(LTAP2_CAEEL)
Swiss-ProtCaenorhabditis elegansLipid transfer auxiliary protein 2;
Q95XD0
(EXOS2_CAEEL)
Swiss-Prot
Caenorhabditis elegansExosome complex component RRP4 homolog;
G5EGP8
(CATZ1_CAEEL)
Swiss-Prot
Caenorhabditis elegansCathepsin Z-1;
O16991
(TF2B_CAEEL)
Swiss-Prot
Caenorhabditis elegansTranscription initiation factor IIB;
General transcription factor TFIIB;
P90992
(M2OM_CAEEL)
Swiss-Prot
Caenorhabditis elegansMitochondrial 2-oxoglutarate/malate carrier protein;
Mitochondrial solute carrier 1;
Q20024
(STX3_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative syntaxin-3;
G1FC92
(MIG21_CAEEL)
Swiss-Prot
Caenorhabditis elegansAbnormal cell migration protein 21;
Q17428
(SR5A3_CAEEL)
Swiss-Prot
Caenorhabditis elegansPolyprenal reductase;
Q09637
(CYP9_CAEEL)
Swiss-Prot
Caenorhabditis elegansPeptidyl-prolyl cis-trans isomerase 9;
Cyclophilin-9;
Rotamase 9;
Q09964
(YS94_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative G-protein coupled receptor B0244.4;
Q9N4Y9
(ZFPL1_CAEEL)
Swiss-ProtCaenorhabditis elegansZinc finger protein-like 1 homolog;
P41938
(HCDH2_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable 3-hydroxyacyl-CoA dehydrogenase B0272.3;
1 - 50 of 27512
Caenorhabditis elegans

Caenorhabditis elegans is a free-living, transparent nematode, about 1 mm in length, that lives in temperate soil environments. The name means "elegant new rod".

C. elegans is a model organism for nervous system development as well as senescence. Of interest to researchers is the phenomenon of eutely: each adult hermaphrodite has exactly 959 and each adult male exactly 1031 somatic cell nuclei

C. elegans was the first multicellular organism to have its whole genome sequenced in 1998.

"Caenorhabditis elegans", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Caenorhabditis elegans, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Caenorhabditis elegans for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Caenorhabditis elegans, please visit UniProtKB.

You can easily download the latest protein sequences for Caenorhabditis elegans proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2026_01 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
19,80413,37223,678

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Caenorhabditis elegans reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Caenorhabditis elegans proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer11-mer12-mer14-mer15-mer16-mer18-mer20-mer24-mer25-mer26-mer32-mer33-mer34-mer35-mer40-mer41-mer44-mer48-mer51-mer55-mer60-mer62-mer
20,7971,93917338012210163971412763151111111011182111151
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