Filter results by: Taxon Proteome
1 - 50 of 27444 UniProtKB matches
(34528 models, 675 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
Q9U1R1
(CEH51_CAEEL)
Swiss-Prot
Caenorhabditis elegansHomeobox protein ceh-51;
Q09385
(SYF2_CAEEL)
Swiss-Prot
Caenorhabditis elegansPre-mRNA-splicing factor syf-2;
Q09947
(YSH6_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein F12A10.6;
Q23652
(USIP1_CAEEL)
Swiss-ProtCaenorhabditis elegansU6 snRNA-specific terminal uridylyltransferase;
PAP-associated domain-containing protein;
U6 snRNA-interacting protein;
Q23536
(LGG2_CAEEL)
Swiss-Prot
Caenorhabditis elegansProtein lgg-2;
Q95PX3
(TBX7_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative T-box protein 7;
O62518
(YHPK_CAEEL)
Swiss-Prot
Caenorhabditis elegansBrix domain-containing protein ZK795.3;
Q19549
(SRA27_CAEEL)
Swiss-ProtCaenorhabditis elegansSerpentine receptor class alpha-27;
O16991
(TF2B_CAEEL)
Swiss-Prot
Caenorhabditis elegansTranscription initiation factor IIB;
General transcription factor TFIIB;
G1FC92
(MIG21_CAEEL)
Swiss-Prot
Caenorhabditis elegansAbnormal cell migration protein 21;
Q20024
(STX3_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative syntaxin-3;
G5EGP8
(CATZ1_CAEEL)
Swiss-Prot
Caenorhabditis elegansCathepsin Z-1;
Q95US5
(BRE5_CAEEL)
Swiss-Prot
Caenorhabditis elegansBeta-1,3-galactosyltransferase bre-5;
Bacillus thuringiensis toxin-resistant protein 5;
Q09377
(LIN56_CAEEL)
Swiss-ProtCaenorhabditis elegansProtein lin-56;
Abnormal cell lineage protein 56;
Q20257
(TBX11_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative T-box protein 11;
P34366
(YLJ1_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein C50C3.1;
Q09322
(CUP15_CAEEL)
Swiss-Prot
Caenorhabditis elegansCoelomocyte uptake defective protein 15;
Q09292
(ELMD3_CAEEL)
Swiss-ProtCaenorhabditis elegansELMO domain-containing protein C56G7.3;
P53596
(SUCA_CAEEL)
Swiss-Prot
Caenorhabditis elegansSuccinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial;
Succinyl-CoA synthetase subunit alpha;
Q22122
(ZC21A_CAEEL)
Swiss-ProtCaenorhabditis elegansZinc finger C2HC domain-containing protein zchc-1A;
P52652
(TFS2_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative transcription elongation factor S-II;
TFIIS;
G5EFS2
(MSI1H_CAEEL)
Swiss-Prot
Caenorhabditis elegansRNA-binding protein Musashi homolog 1;
Q18428
(SRG15_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class gamma-15;
P34679
(YO41_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein ZK757.1;
Q93235
(AT1B1_CAEEL)
Swiss-Prot
Caenorhabditis elegansSodium/potassium-transporting ATPase subunit beta-1;
Sodium/potassium-dependent ATPase subunit beta-1;
Q95XG9
(OXDA_CAEEL)
Swiss-Prot
Caenorhabditis elegansD-amino-acid oxidase;
P90953
(HLH34_CAEEL)
Swiss-Prot
Caenorhabditis elegansHelix-loop-helix 34;
Q19264
(DEOC_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative deoxyribose-phosphate aldolase;
2-deoxy-D-ribose 5-phosphate aldolase;
Phosphodeoxyriboaldolase;
P34572
(YNV9_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein T16H12.9;
Q9XVD5
(TBX38_CAEEL)
Swiss-Prot
Caenorhabditis elegansT-box protein 38;
Q09343
(YR27_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein W02B3.7;
Q19061
(SRD59_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class delta-59;
Q09376
(TBX35_CAEEL)
Swiss-Prot
Caenorhabditis elegansT-box transcription factor tbx-35;
P34273
(IYD1H_CAEEL)
Swiss-Prot
Caenorhabditis elegansIodotyrosine dehalogenase 1 homolog;
Q10948
(YMP4_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein B0361.4;
O02485
(YDJ1_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein ZK1073.1;
P34444
(YL86_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein F54C8.6;
Q95XD0
(EXOS2_CAEEL)
Swiss-Prot
Caenorhabditis elegansExosome complex component RRP4 homolog;
O17819
(SRG16_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class gamma-16;
Q21215
(GBLP_CAEEL)
Swiss-Prot
Caenorhabditis elegansSmall ribosomal subunit protein RACK1;
Guanine nucleotide-binding protein subunit beta-2-like 1;
O45876
(APH1_CAEEL)
Swiss-Prot
Caenorhabditis elegansGamma-secretase subunit aph-1;
Anterior-pharynx-defective protein 1;
Presenilin enhancer protein 1;
Q22495
(TSP12_CAEEL)
Swiss-Prot
Caenorhabditis elegansTetraspanin-12;
Q95NM6
(NUCG_CAEEL)
Swiss-Prot
Caenorhabditis elegansEndonuclease G, mitochondrial;
Ced-3 protease suppressor 6;
Q9N2K7
(TBX30_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative T-box protein 30/42;
Q9N5Y2
(TECR_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable very-long-chain enoyl-CoA reductase art-1;
G5ED66
(PAX3H_CAEEL)
Swiss-Prot
Caenorhabditis elegansPaired box protein 3 homolog;
G5EEI8
(CHRD1_CAEEL)
Swiss-Prot
Caenorhabditis elegansCysteine and histidine-rich domain-containing protein 1;
CHORD domain-containing protein 1;
Protein CHORD;
P34604
(EI2BA_CAEEL)
Swiss-Prot
Caenorhabditis elegansTranslation initiation factor eIF2B subunit alpha;
eIF2B GDP-GTP exchange factor subunit alpha;
O17730
(THT2_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative thiosulfate sulfurtransferase mpst-1;
Mercaptopyruvate sulfurtransferase homolog 1;
Q20027
(C25HL_CAEEL)
Swiss-ProtCaenorhabditis elegansCholesterol 25-hydroxylase-like protein;
1 - 50 of 27444
Caenorhabditis elegans

Caenorhabditis elegans is a free-living, transparent nematode, about 1 mm in length, that lives in temperate soil environments. The name means "elegant new rod".

C. elegans is a model organism for nervous system development as well as senescence. Of interest to researchers is the phenomenon of eutely: each adult hermaphrodite has exactly 959 and each adult male exactly 1031 somatic cell nuclei

C. elegans was the first multicellular organism to have its whole genome sequenced in 1998.

"Caenorhabditis elegans", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Caenorhabditis elegans, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Caenorhabditis elegans for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Caenorhabditis elegans, please visit UniProtKB.

You can easily download the latest protein sequences for Caenorhabditis elegans proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2025_03 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
19,82413,22623,645

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Caenorhabditis elegans reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Caenorhabditis elegans proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer11-mer12-mer14-mer16-mer18-mer20-mer24-mer25-mer32-mer34-mer40-mer41-mer44-mer48-mer51-mer55-mer60-mer62-mer
20,7511,962158388118103739714137771111110183211141
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