Filter results by: Taxon Proteome
1 - 50 of 27512 UniProtKB matches
(34539 models, 715 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
P34560
(RMD1_CAEEL)
Swiss-Prot
Caenorhabditis elegansRegulator of microtubule dynamics protein 1;
Q09458
(YQ37_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein C09F5.7;
Q94420
(MEL26_CAEEL)
Swiss-Prot
Caenorhabditis elegansProtein maternal effect lethal 26;
P27798
(CALR_CAEEL)
Swiss-Prot
Caenorhabditis elegansCalreticulin;
P34553
(YNK2_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein R10E12.2;
Q03613
(NPR29_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable G-protein coupled receptor npr-29;
Q21824
(TDX1_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable peroxiredoxin prdx-3;
Thiol-specific antioxidant protein;
Thioredoxin peroxidase;
Thioredoxin-dependent peroxide reductase;
Thioredoxin-dependent peroxiredoxin 1;
P91851
(NMNA2_CAEEL)
Swiss-Prot
Caenorhabditis elegansNicotinamide/nicotinic acid mononucleotide adenylyltransferase 2;
Nicotinamide mononucleotide adenylyltransferase 2;
Nicotinate-nucleotide adenylyltransferase 2;
P17486
(EGL5_CAEEL)
Swiss-Prot
Caenorhabditis elegansHomeobox protein egl-5;
Abdominal-B homolog egl-5;
Egg-laying defective protein 5;
Homeobox protein ceh-11;
Q19980
(GCH1_CAEEL)
Swiss-Prot
Caenorhabditis elegansGTP cyclohydrolase 1;
GTP cyclohydrolase I;
P34337
(YK13_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative tyrosine-protein phosphatase C15H7.3;
O62169
(NTR2_CAEEL)
Swiss-Prot
Caenorhabditis elegansNematocin receptor 2;
O61902
(NDX2_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative nudix hydrolase 2;
P55956
(ASP3_CAEEL)
Swiss-Prot
Caenorhabditis elegansAspartic protease 3;
P54412
(EF1G_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable elongation factor 1-gamma;
eEF-1B gamma;
P34370
(I5P2_CAEEL)
Swiss-Prot
Caenorhabditis elegansInositol polyphosphate 5-phosphatase;
Ciliary localization protein 1;
P34349
(PHOCN_CAEEL)
Swiss-Prot
Caenorhabditis elegansMOB-like protein phocein;
Mps one binder 4 homolog;
Q7JP68
(KAPC2_CAEEL)
Swiss-Prot
Caenorhabditis eleganscAMP-dependent protein kinase, catalytic subunit-like;
Q22687
(IL171_CAEEL)
Swiss-Prot
Caenorhabditis elegansInterleukin cytokine-related protein 17.1;
Interleukin 17 cytokine-related protein 1;
O16264
(PEBPH_CAEEL)
Swiss-Prot
Caenorhabditis elegansPhosphatidylethanolamine-binding protein homolog F40A3.3;
Q27539
(CLPP1_CAEEL)
Swiss-Prot
Caenorhabditis elegansATP-dependent Clp protease proteolytic subunit 1, mitochondrial;
Endopeptidase Clp;
Q09969
(BNIP3_CAEEL)
Swiss-ProtCaenorhabditis elegansNIP3 homolog;
Daf-16/FOXO controlled germline tumor affecting-1;
Q09394
(YR75_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein F43C1.5;
P34461
(SODE_CAEEL)
Swiss-Prot
Caenorhabditis elegansExtracellular superoxide dismutase [Cu-Zn];
Q18169
(LOVG_CAEEL)
Swiss-Prot
Caenorhabditis elegansEsterase C25G4.2;
Q95X44
(VATE_CAEEL)
Swiss-Prot
Caenorhabditis elegansV-type proton ATPase subunit E;
Q11109
(YX02_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein C03B1.2;
Q09652
(GSTK1_CAEEL)
Swiss-Prot
Caenorhabditis elegansGlutathione S-transferase kappa 1;
GST class-kappa;
Q94230
(PLP1_CAEEL)
Swiss-Prot
Caenorhabditis elegansTranscriptional activator plp-1;
Pur-alpha-like protein 1;
Q18612
(HND1_CAEEL)
Swiss-Prot
Caenorhabditis elegansHand transcription factor 1;
Q20939
(PDXH_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative pyridoxamine 5'-phosphate oxidase;
PNP/PMP oxidase;
Q22306
(YW12_CAEEL)
Swiss-Prot
Caenorhabditis elegansUPF0046 protein T07D4.2;
G5EEI4
(ASP1_CAEEL)
Swiss-Prot
Caenorhabditis elegansAspartic protease 1;
Q10454
(KARG1_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable arginine kinase F46H5.3;
Q21181
(NAS19_CAEEL)
Swiss-Prot
Caenorhabditis elegansZinc metalloproteinase nas-19;
Nematode astacin 19;
Q9NA56
(TBX39_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative T-box protein 39;
O16262
(NIPI4_CAEEL)
Swiss-Prot
Caenorhabditis elegansProtein nipi-4;
No induction of peptide after drechmeria infection protein 4;
G5EEG9
(HLH2_CAEEL)
Swiss-Prot
Caenorhabditis elegansHelix-loop-helix protein hlh-2;
Q94175
(BEST9_CAEEL)
Swiss-Prot
Caenorhabditis elegansBestrophin homolog 9;
Q93847
(WDR52_CAEEL)
Swiss-Prot
Caenorhabditis elegansWD repeat-containing protein wdr-5.2;
P52899
(ODPA_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial;
Q09220
(YP71_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein B0228.1;
P34303
(ZTF30_CAEEL)
Swiss-ProtCaenorhabditis elegansZinc finger transcription factor family protein 30;
Q95003
(GPX3_CAEEL)
Swiss-Prot
Caenorhabditis elegansGlutathione peroxidase 3;
Q09936
(CLIK2_CAEEL)
Swiss-ProtCaenorhabditis elegansCalponin-like protein clik-2;
P91277
(HRPK1_CAEEL)
Swiss-Prot
Caenorhabditis elegansHeterogeneous nuclear ribonucleoprotein K homolog;
P34298
(DOXA1_CAEEL)
Swiss-Prot
Caenorhabditis elegansDual oxidase maturation factor 1;
O62238
(SYP3_CAEEL)
Swiss-Prot
Caenorhabditis elegansSynaptonemal complex protein 3;
Q03599
(IRL34_CAEEL)
Swiss-Prot
Caenorhabditis elegansProtein irld-34;
Q18674
(RRP1_CAEEL)
Swiss-Prot
Caenorhabditis elegansRibosomal RNA processing protein 1 homolog;
RRP1-like protein;
1 - 50 of 27512
Caenorhabditis elegans

Caenorhabditis elegans is a free-living, transparent nematode, about 1 mm in length, that lives in temperate soil environments. The name means "elegant new rod".

C. elegans is a model organism for nervous system development as well as senescence. Of interest to researchers is the phenomenon of eutely: each adult hermaphrodite has exactly 959 and each adult male exactly 1031 somatic cell nuclei

C. elegans was the first multicellular organism to have its whole genome sequenced in 1998.

"Caenorhabditis elegans", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Caenorhabditis elegans, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Caenorhabditis elegans for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Caenorhabditis elegans, please visit UniProtKB.

You can easily download the latest protein sequences for Caenorhabditis elegans proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2026_01 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
19,80413,37223,678

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Caenorhabditis elegans reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Caenorhabditis elegans proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer11-mer12-mer14-mer15-mer16-mer18-mer20-mer24-mer25-mer26-mer32-mer33-mer34-mer35-mer40-mer41-mer44-mer48-mer51-mer55-mer60-mer62-mer
20,7971,93917338012210163971412763151111111011182111151
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