Filter results by: Taxon Proteome
1 - 50 of 27451 UniProtKB matches
(33820 models, 562 structures.)
UniProtKB AC
(Name)
UniProtKB Section
 
Homology Model
 
Experimental Structure
OrganismDescription
Q23450
(COA7_CAEEL)
Swiss-Prot
Caenorhabditis elegansCytochrome c oxidase assembly factor 7 homolog;
Beta-lactamase hcp-like protein coa-7;
Sel1 repeat-containing protein 1 homolog;
O76584
(GPA11_CAEEL)
Swiss-Prot
Caenorhabditis elegansGuanine nucleotide-binding protein alpha-11 subunit;
Q966A0
(SVH11_CAEEL)
Swiss-ProtCaenorhabditis elegansPutative galactoside 2-alpha-L-fucosyltransferase svh-11;
Suppressor of vhp-1 deletion lethality protein svh-11;
Q20054
(MAB21_CAEEL)
Swiss-Prot
Caenorhabditis elegansProtein male abnormal 21;
P48458
(YT91_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative serine/threonine-protein phosphatase C06A1.3;
P34520
(YM44_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein K11H3.4;
Q10907
(YWO4_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable G-protein coupled receptor AH9.4;
Q20787
(S35B3_CAEEL)
Swiss-Prot
Caenorhabditis elegansAdenosine 3'-phospho 5'-phosphosulfate transporter 2;
Adenosine 3'-phosphate 5'-phosphosulfate transporter;
PAPS transporter 2;
Solute carrier family 35 member B3 homolog;
Q18347
(YBWL_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative protein C31H2.4;
Q9BIB3
(PPME1_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable protein phosphatase methylesterase 1;
O62488
(SRE27_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class epsilon-27;
Q93743
(GPA6_CAEEL)
Swiss-Prot
Caenorhabditis elegansGuanine nucleotide-binding protein alpha-6 subunit;
O17933
(NHR53_CAEEL)
Swiss-Prot
Caenorhabditis elegansNuclear hormone receptor family member nhr-53;
Q20907
(GPA8_CAEEL)
Swiss-Prot
Caenorhabditis elegansGuanine nucleotide-binding protein alpha-8 subunit;
Q21012
(ENOPH_CAEEL)
Swiss-Prot
Caenorhabditis elegansEnolase-phosphatase E1;
2,3-diketo-5-methylthio-1-phosphopentane phosphatase;
Q20655
(14332_CAEEL)
Swiss-Prot
Caenorhabditis elegans14-3-3-like protein 2;
Q09585
(APTF1_CAEEL)
Swiss-Prot
Caenorhabditis elegansTranscription factor aptf-1;
AP2 transcription factor aptf-1;
Q09956
(DAMT1_CAEEL)
Swiss-Prot
Caenorhabditis elegansDNA N6-methyl methyltransferase;
DNA N6 adenine methyltransferase 1;
Q9XWR6
(RAB28_CAEEL)
Swiss-Prot
Caenorhabditis elegansRas-related protein Rab-28;
O45306
(SRE21_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class epsilon-21;
P41932
(14331_CAEEL)
Swiss-Prot
Caenorhabditis elegans14-3-3-like protein 1;
Partitioning defective protein 5;
O17816
(SRE38_CAEEL)
Swiss-Prot
Caenorhabditis elegansSerpentine receptor class epsilon-38;
P34302
(YKQ7_CAEEL)
Swiss-ProtCaenorhabditis elegansPutative glycosyltransferase C06E1.7;
P34530
(YM91_CAEEL)
Swiss-ProtCaenorhabditis elegansUncharacterized protein M01A8.1;
O45830
(NDX1_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative nudix hydrolase 1;
Q95008
(PSA5_CAEEL)
Swiss-Prot
Caenorhabditis elegansProteasome subunit alpha type-5;
O01974
(EIF3H_CAEEL)
Swiss-Prot
Caenorhabditis elegansEukaryotic translation initiation factor 3 subunit H;
A3QMC8
(GMPPB_CAEEL)
Swiss-Prot
Caenorhabditis elegansMannose-1-phosphate guanyltransferase beta;
GDP-mannose pyrophosphorylase B;
GTP-mannose-1-phosphate guanylyltransferase beta;
Q20781
(CAH1_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative carbonic anhydrase-like protein 1;
G5EGN3
(ELT6_CAEEL)
Swiss-ProtCaenorhabditis elegansTranscription factor elt-6;
Erythroid-like transcription factor family elt-6;
Q09293
(TOFU6_CAEEL)
Swiss-Prot
Caenorhabditis elegansEmbryonic developmental protein tofu-6;
21U-RNA biogenesis fouled up protein 6;
Maternal effect lethal protein 47;
P34387
(TG198_CAEEL)
Swiss-Prot
Caenorhabditis elegansCell-death-related nuclease 7;
G2HK15
(APTF2_CAEEL)
Swiss-Prot
Caenorhabditis elegansTranscription factor aptf-2;
P91424
(TFB1M_CAEEL)
Swiss-Prot
Caenorhabditis elegansDimethyladenosine transferase 1, mitochondrial;
Mitochondrial 12S rRNA dimethylase 1;
Mitochondrial transcription factor B1;
S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase 1;
Q22398
(NAS22_CAEEL)
Swiss-Prot
Caenorhabditis elegansZinc metalloproteinase nas-22;
Nematode astacin 22;
G5EEQ5
(REF1_CAEEL)
Swiss-ProtCaenorhabditis elegansRegulator of fusion ref-1;
Q09599
(SLBP_CAEEL)
Swiss-Prot
Caenorhabditis elegansHistone RNA hairpin-binding protein;
Histone stem-loop-binding protein;
Q9XV46
(MOE3_CAEEL)
Swiss-ProtCaenorhabditis elegansCCCH-type zinc finger protein moe-3;
Maturation oocyte expansion protein 3;
P34658
(YOUB_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein ZK637.12;
O62126
(TM41_CAEEL)
Swiss-ProtCaenorhabditis elegansTransmembrane protein 41 homolog;
Q10019
(YSW4_CAEEL)
Swiss-Prot
Caenorhabditis elegansUncharacterized protein T25D10.4;
Q27504
(CAH3_CAEEL)
Swiss-Prot
Caenorhabditis elegansPutative carbonic anhydrase 3;
Carbonate dehydratase 3;
Q20432
(CNEP1_CAEEL)
Swiss-Prot
Caenorhabditis elegansCTD nuclear envelope phosphatase 1 homolog;
Serine/threonine-protein phosphatase dullard homolog;
Small C-terminal domain phosphatase-like phosphatase 21;
Q9NEN6
(RS6_CAEEL)
Swiss-Prot
Caenorhabditis elegansSmall ribosomal subunit protein eS6;
40S ribosomal protein S6;
O62106
(IF6_CAEEL)
Swiss-Prot
Caenorhabditis elegansEukaryotic translation initiation factor 6;
O17586
(PSA6_CAEEL)
Swiss-Prot
Caenorhabditis elegansProteasome subunit alpha type-6;
Proteasome subunit alpha 1;
O01916
(CRLS1_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable cardiolipin synthase (CMP-forming);
P34497
(GLNA_CAEEL)
Swiss-Prot
Caenorhabditis elegansProbable glutamine synthetase;
Glutamate--ammonia ligase;
O02655
(DCAM_CAEEL)
Swiss-Prot
Caenorhabditis elegansS-adenosylmethionine decarboxylase proenzyme;
S-adenosylmethionine decarboxylase alpha chain;
S-adenosylmethionine decarboxylase beta chain;
Q93890
(SRF3_CAEEL)
Swiss-Prot
Caenorhabditis elegansUDP-galactose/UDP-N-acetylglucosamine transporter srf-3;
Surface antigenicity abnormal 3;
1 - 50 of 27451
Caenorhabditis elegans

Caenorhabditis elegans is a free-living, transparent nematode, about 1 mm in length, that lives in temperate soil environments. The name means "elegant new rod".

C. elegans is a model organism for nervous system development as well as senescence. Of interest to researchers is the phenomenon of eutely: each adult hermaphrodite has exactly 959 and each adult male exactly 1031 somatic cell nuclei

C. elegans was the first multicellular organism to have its whole genome sequenced in 1998.

"Caenorhabditis elegans", Wikipedia: The Free Encyclopedia

Protein models in Repository

From left to right: i) The number of proteins in the reference proteome of Caenorhabditis elegans, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Caenorhabditis elegans for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.

For information on the latest proteome for Caenorhabditis elegans, please visit UniProtKB.

You can easily download the latest protein sequences for Caenorhabditis elegans proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2024_03 that was used for the most up to date SWISS-MODEL Repository.

Proteins in proteomeSequences modelledModels
19,83212,87723,162

Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.

Structural Coverage

The plot shows the evolution over years (x-axis) of the fraction of Caenorhabditis elegans reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.

Residue Coverage

This chart shows the percentage of residues in the Caenorhabditis elegans proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.

Oligomeric State

Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.

Single Chain2-mer3-mer4-mer5-mer6-mer7-mer8-mer9-mer10-mer12-mer14-mer16-mer20-mer24-mer25-mer26-mer32-mer34-mer40-mer41-mer44-mer48-mer55-mer60-mer62-mer
20,3831,8621623741171048349133858410117110321221
Download