| UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
|---|---|---|---|---|
| A0A0B4LFY9 (STING_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Stimulator of interferon genes protein homolog; | |
| P55830 (RS3A_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Small ribosomal subunit protein eS1; 40S ribosomal protein S3a; C3 protein; | |
| Q9VNA5 (PSB4_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Proteasome subunit beta type-4; Proteasome subunit beta type-7; | |
| Q9VVG6 (COQ4_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; 4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase; Coenzyme Q biosynthesis protein 4 homolog; | |
| Q9VWS4 (WGN_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Tumor necrosis factor receptor superfamily member wgn; Protein wengen; | |
| Q9VUT8 (COMM2_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Protein commissureless 2; | |
| Q9VSY6 (SERB_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Phosphoserine phosphatase; O-phosphoserine phosphohydrolase; | |
| P38979 (RSSA_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Small ribosomal subunit protein uS2; 40S ribosomal protein SA; K14; Laminin receptor homolog; Protein stubarista; | |
| O18405 (SURF4_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Surfeit locus protein 4 homolog; | |
| Q9VFM9 (TWF_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Twinfilin; | |
| Q9V637 (PSMF1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Proteasome inhibitor PI31 subunit; | |
| Q7JWW5 (CTU1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Cytoplasmic tRNA 2-thiolation protein 1; Cytoplasmic tRNA adenylyltransferase 1; | |
| Q9V3I8 (OGG1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | N-glycosylase/DNA lyase; dOgg1; 8-oxoguanine DNA glycosylase; 3.2.2.-; DNA-(apurinic or apyrimidinic site) lyase; AP lyase; 4.2.99.18; | |
| Q9V9P3 (TI50A_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Mitochondrial import inner membrane translocase subunit TIM50-A; Tiny tim 3; | |
| Q9XYM0 (CRK_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Adapter molecule Crk; | |
| P46223 (RL7A_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Large ribosomal subunit protein eL8; 60S ribosomal protein L7a; | |
| P32029 (FD5_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Fork head domain-containing protein FD5; | |
| Q9XYQ2 (UN119_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Protein unc-119 homolog; | |
| C0HKF7 (SER1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Serine protease 1; Protein Jonah 99Cii; | |
| C0HKF8 (SER2_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Serine protease 2; Protein Jonah 99Ciii; | |
| Q9VU31 (EXD1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Protein Exd1 homolog; Exonuclease 3'-5' domain-containing protein 1 homolog; Exonuclease 3'-5' domain-like-containing protein 1 homolog; | |
| Q9VZU4 (NDUS3_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial; NADH dehydrogenase (Ubiquinone) 30 kDa subunit; | |
| Q9V4Q8 (RU2A_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Probable U2 small nuclear ribonucleoprotein A'; | |
| P29829 (GBB2_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Guanine nucleotide-binding protein subunit beta-2; | |
| A1ZBR5 (AKTP2_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Protein crossbronx-like; | |
| P91931 (DCAM_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | S-adenosylmethionine decarboxylase proenzyme; S-adenosylmethionine decarboxylase alpha chain; S-adenosylmethionine decarboxylase beta chain; | |
| Q9VV41 (OSGEP_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Probable tRNA N6-adenosine threonylcarbamoyltransferase; N6-L-threonylcarbamoyladenine synthase; t(6)A37 threonylcarbamoyladenosine biosynthesis protein Tcs3; tRNA threonylcarbamoyladenosine biosynthesis protein Tcs3; | |
| Q9VPP5 (RNH2A_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Ribonuclease H2 subunit A; Ribonuclease HI large subunit; Ribonuclease HI subunit A; | |
| P10552 (FMRF_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | FMRFamide-related peptides; FMRFamide A; Corticotropin-releasing factor-like; AAMDRY-amide; DPKQDFMRF-amide; TPAEDFMRF-amide; SDNFMRF-amide; SPKQDFMRF-amide; PDNFMRF-amide; SAPQDFVRS-amide; MDSNFIRF-amide; | |
| Q9W5N0 (COA7_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Cytochrome c oxidase assembly factor 7 homolog; Beta-lactamase hcp-like protein CG13865; Sel1 repeat-containing protein 1 homolog; | |
| Q9VRJ9 (OTU1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Ubiquitin thioesterase Otu1; Yod1 deubiquitinase; | |
| Q9VMA2 (GALT_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Probable galactose-1-phosphate uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase; | |
| Q9W0P5 (GALE_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | UDP-glucose 4-epimerase; Galactowaldenase; UDP-N-acetylgalactosamine 4-epimerase; UDP-N-acetylglucosamine 4-epimerase; UDP-galactose 4-epimerase; | |
| Q9VF71 (CUTC_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Copper homeostasis protein cutC homolog; | |
| Q9VHF2 (PTER_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Phosphotriesterase-related protein; Parathion hydrolase-related protein; | |
| M9PF61 (ALDR_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Aldo-keto reductase 1B; Aldose reductase; | |
| P10181 (ROUGH_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Homeobox protein rough; | |
| Q9W4P5 (VA0D1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | V-type proton ATPase subunit d 1; V-ATPase 39 kDa subunit; Vacuolar H+ ATPase subunit AC39-1; Vacuolar proton pump subunit d 1; | |
| Q9VCQ3 (VA0D2_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Probable V-type proton ATPase subunit d 2; Vacuolar H+ ATPase subunit AC39-2; Vacuolar proton pump subunit d 2; | |
| Q9VTV1 (THOC6_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | THO complex subunit 6; | |
| Q9VKM6 (VPS72_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Vacuolar protein sorting-associated protein 72 homolog; Protein YL-1; | |
| P42278 (TRYT_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Trypsin theta; | |
| A1Z8R8 (PARL_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Presenilins-associated rhomboid-like protein, mitochondrial; Mitochondrial intramembrane-cleaving protease Parl; Rhomboid-7; | |
| Q9VL00 (OTUBL_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Ubiquitin thioesterase otubain-like; Ubiquitin-specific-processing protease otubain-like; | |
| B7Z0I7 (SPN1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Snurportin-1; | |
| P05552 (ADF1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Transcription factor Adf-1; ADH distal factor 1; | |
| P42279 (TRYU_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Trypsin eta; | |
| Q9VWA8 (FRG1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Protein FRG1 homolog; | |
| Q24050 (ELP5_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Elongator complex protein 5; | |
| Q9U6B8 (ORAI1_DROME) | Swiss-Prot | Drosophila melanogaster (Fruit fly) | Calcium release-activated calcium channel protein 1; Protein orai; |
Drosophila melanogaster is a species of fruit fly in the family Drosophilidae. The species is known generally as the common fruit fly or vinegar fly. D. melanogaster is commonly considered a pest due to its tendency to infest habitations and establishments where fruit is found; the flies may collect in homes, restaurants, stores, and other locations.
Starting with Charles W. Woodworth's proposal of the use of this species as a model organism, D. melanogaster continues to be widely used for biological research in studies of genetics, physiology, microbial pathogenesis, and life history evolution. It is typically used because it is an animal species that is easy to care for, has four pairs of chromosomes, breeds quickly, and lays many eggs.
The genome of D. melanogaster was first sequenced in 2000.
From left to right: i) The number of proteins in the reference proteome of Drosophila melanogaster, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Drosophila melanogaster for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Drosophila melanogaster, please visit UniProtKB.
You can easily download the latest protein sequences for Drosophila melanogaster proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2026_01 that was used for the most up to date SWISS-MODEL Repository.
| Proteins in proteome | Sequences modelled | Models |
| 13,826 | 10,389 | 19,931 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Drosophila melanogaster reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Drosophila melanogaster proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
| Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 12-mer | 14-mer | 15-mer | 16-mer | 18-mer | 24-mer | 25-mer | 32-mer | 34-mer | 40-mer | 48-mer | 60-mer | 62-mer |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17,463 | 1,689 | 135 | 424 | 29 | 95 | 8 | 23 | 2 | 9 | 10 | 6 | 1 | 5 | 1 | 9 | 1 | 8 | 1 | 6 | 2 | 3 | 1 |