A0A0M3KKW9 | SWISS-MODEL Repository

A0A0M3KKW9 (A0A0M3KKW9_9HIV1) Human immunodeficiency virus 1

clade A/E 93TH057 HIV-1 gp120 core UniProtKB InterPro Interactive Modelling

353 aa; Sequence (Fasta) ; 1 identical sequence: Homo sapiens: A0A0M3KKW8

It is possible new templates exist for this target since these models were created.

Available Structures

57 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
Crystal structure of broadly neutralizing antibody N49P9.3-FR3-3 Fab in complex with HIV-1 Clade A/…	7sx7 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	11×NAG; 1×EPE;
Assess
Crystal structure of broadly neutralizing VH1-46 germline-derived CD4-binding site-directed antibod…	5f96 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	12×NAG; 3×EPE;
Assess
Crystal Structure of Broadly Neutralizing VRC01-class Antibody N6 in Complex with HIV-1 Clade AE St…	5te6 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	11×NAG; 1×EPE;
Assess
Crystal structure of a VRC01-lineage antibody, 45-VRC01.H03+06.D-001739, in complex with clade A/E …	4s1q SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	11×NAG;
Assess
Structure of NIH45-46 Fab in complex with gp120 of 93TH057 HIV	3u7y SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P01834; P01857;	1-353	1×NAG; 1×FLC; 6×NAG; 1×CL;
Assess
Rhesusized RV305 DH677.3 Fab bound to Clade A/E 93TH057 HIV-1 gp120 core.	7n8q SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	9×NAG;
Assess
Crystal structure of the RV144 C1-C2 specific antibody CH54 Fab in complex with HIV-1 CLADE A/E GP1…	6mg7 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	10×NAG;
Assess
Crystal structure of the non-neutralizing and ADCC-potent C11-like antibody N12-i3 in complex with …	5w4l SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	11×NAG; 1×CL;
Assess
Crystal structure of the ADCC-potent antibody N60-i3 Fab in complex with HIV-1 Clade A/E gp120 W69A…	5kjr SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	10×NAG; 1×MPD;
Assess
Crystal Structure of the RV305 C1-C2 specific ADCC potent antibody DH677.3 Fab in complex with HIV-…	6mfp SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	12×NAG;
Assess
Crystal structure of a VRC01-lineage antibody, 45-VRC01.H08.F-117225, in complex with clade A/E HIV…	4s1r SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	11×NAG;
Assess
Crystal structure of a VRC01-lineage antibody, 45-VRC01.H5.F-185917, in complex with clade A/E HIV-…	4s1s SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	10×NAG; 1×EPE;
Assess
Crystal structure of an immature VRC01-class antibody DRVIA7 from a Chinese donor bound to clade A/…	5cd5 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	2×NAG; 1×NAG; 1×NAG; 6×NAG;
Assess
Crystal structure of broadly neutralizing antibody N49P9.3 Fab in complex with HIV-1 Clade A/E stra…	7sx6 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	10×NAG; 1×CL; 1×MG;
Assess
CRYSTAL STRUCTURE OF THE NON-NEUTRALIZING AND ADCC-POTENT ANTIBODY C11 IN COMPLEX WITH HIV-1 CLADE …	6oej SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	1×NAG; 11×NAG;
Assess
CRYSTAL STRUCTURE OF the RV144 C1-C2 SPECIFIC ANTIBODY CH55 FAB IN COMPLEX WITH HIV-1 CLADE A/E GP1…	6ofi SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-353	10×NAG;
Assess
Crystal structure of broadly neutralizing VH1-46 germline-derived CD4-binding site-directed antibod…	5f9o SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-352	12×NAG; 2×EPE; 1×15P;
Assess
Crystal structure of CD4 binding site antibody N60P23 in complex with HIV-1 clade A/E strain 93TH05…	5wb9 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	2-353	8×NAG; 1×MPD; 1×MPO;
Assess
Crystal structure of the broadly neutralizing antibody N49P6 Fab in complex with HIV-1 Clade A/E st…	6oz2 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-352	11×NAG;
Assess
Crystal Structure of Broadly Neutralizing Antibody N49P7 in Complex with HIV-1 Clade AE strain 93TH…	6bck SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-352	11×NAG; 2×MPD;
Assess
Crystal structure of 354NC37 Fab in complex with HIV-1 clade AE strain 93TH057 gp120	5uem SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	1-352	1×NAG; 1×NAG; 1×NAG; 6×NAG; 1×EPE;
Assess
Crystal structure of broadly neutralizing VH1-46 germline-derived CD4-binding site-directed antibod…	5f9w SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	2-352	14×NAG; 2×PO4;
Assess
CRYSTAL STRUCTURE OF THE ADCC-POTENT, WEAKLY NEUTRALIZING HIV ENV CO-RECEPTOR BINDING SITE ANTIBODY…	6w4m SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	4-353	9×NAG;
Assess
Crystal structure of broadly neutralizing antibody N49P9.1 Fab in complex with HIV-1 Clade A/E stra…	6oz3 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	4-352	11×NAG; 1×NA;
Assess
Crystal structure of the stabilized inner domain of clade A/E HIV-1 gp120 from E. coli in complex w…	4yc2 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	2-141
Assess
CRYSTAL STRUCTURE OF THE INNER DOMAIN OF CLADE A/E HIV-1 GP120 IN COMPLEX WITH THE ADCC-POTENT RHES…	5fcu SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	2-140	1×NAG; 3×SO4; 3×CL;
Assess
Crystal structure of the stabilized inner domain of clade A/E HIV-1 gp120 in complex with the ADCC …	4ybl SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer	7-141
Assess
Crystal structure of HIV-1 LM/HT Clade A/E CRF01 gp120 core in complex with (S)-MCG-III-188-A02.	6onf SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	10×NAG; 1×MW4; 1×EPE;
Assess
Crystal structure of HIV-1 gp120 core in complex with NBD-11021, a small molecule CD4-antagonist	4rz8 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	9×NAG; 1×3ZM; 1×EPE;
Assess
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with AS-I-261	4dvv SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	11×NAG; 1×EPE; 1×0M1;
Assess
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-14204, an HIV-1 gp120 a…	8f9z SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	6×NAG; 1×XKW; 1×EPE;
Assess
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-14208, an HIV-1 gp120 a…	8fa0 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	8×NAG; 2×XKR; 1×EPE;
Assess
Crystal structure of clade A/E HIV-1 gp120 core in complex with NBD-14010	5u6e SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	11×NAG; 1×82M; 1×EPE;
Assess
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-557	4dvs SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	11×NAG; 1×0LY; 1×EPE;
Assess
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-10007	4dkv SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	11×NAG; 1×EPE; 1×0KW;
Assess
Crystal Structure of HIV-1 LM/HT Clade A/E CRF01 GP120 Core in Complex with DL-I-101	8gd3 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	10×NAG; 1×EPE; 1×Z1Z; 1×PEG;
Assess
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with MAE-II-167	4dvw SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	10×NAG; 1×EPE; 1×0M4;
Assess
CRYSTAL STRUCTURE OF UNLIGANDED HIV-1 LM/HS CLADE A/E CRF01 GP120 CORE	6utd SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	10×NAG; 1×EPE;
Assess
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with AS-II-37	4dvt SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	11×NAG; 1×0LZ; 1×EPE;
Assess
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with MAE-II-188	4dvx SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	11×NAG; 1×0M5; 1×EPE;
Assess
Crystal Structure of HIV-1 LM/HT Clade A/E CRF01 GP120 Core in Complex with TFH-I-070-A6	8gd0 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	12×NAG; 1×Z3F; 1×EPE; 3×CL;
Assess
Crystal structure of HIV-1 LM/HT Clade A/E CRF01 gp120 core in complex with (S)-MCG-IV-226.	6ooo SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	10×NAG; 1×MXJ; 1×EPE;
Assess
Crystal Structure of HIV-1 LM/HT CLADE A/E CRF01 GP120 Core in Complex with TFH-II-128	8gdj SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	12×NAG; 1×Z6F; 1×EPE;
Assess
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with NBD-09027	4dku SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	10×NAG; 1×EPE; 1×0KU;
Assess
CRYSTAL STRUCTURE OF HIV-1 LM/HS CLADE A/E CRF01 GP120 CORE IN COMPLEX WITH (S)-MCG-IV-210	6usw SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	10×NAG; 1×O51; 1×EPE;
Assess
CRYSTAL STRUCTURE OF UNLIGANDED HIV-1 LM/HT CLADE A/E CRF01 GP120 CORE	6utb SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	10×NAG; 1×EPE;
Assess
Crystal Structure of HIV-1 LM/HT Clade A/E CRF01 GP120 Core in Complex with DL-I-102	8gd5 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	10×NAG; 1×EPE; 1×Z2O;
Assess
CRYSTAL STRUCTURE OF HIV-1 LM/HT CLADE A/E CRF01 GP120 CORE IN COMPLEX WITH (S)-MCG-IV-210.	6p9n SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	10×NAG; 1×O51; 1×EPE;
Assess
CRYSTAL STRUCTURE OF HIV-1 LM/HS CLADE A/E CRF01 GP120 CORE IN COMPLEX WITH BNM-III-170	6ut1 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	10×NAG; 1×5VG; 1×EPE;
Assess
Crystal Structure of HIV-1 LM/HT CLADE A/E CRF01 GP120 Core in Complex with TFH-II-151	8gdk SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	13×NAG; 1×Z7N; 1×EPE; 3×CL;
Assess
Crystal Structure of HIV-1 LM/HT Clade A/E CRF01 GP120 Core in Complex with ZXC-I-092	8gd1 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	10×NAG; 1×Z1I; 1×EPE; 1×CL;
Assess
CRYSTAL STRUCTURE OF HIV-1 LM/HT CLADE A/E CRF01 GP120 CORE IN COMPLEX WITH YIR-821	8dcq SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-353	10×NAG; 1×R5K; 1×EPE;
Assess
Crystal structure of HIV-1 LM/HT Clade A/E CRF01 gp120 core in complex with (S)-MCG-III-188-A01.	6one SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-352	11×NAG; 1×MVY; 1×EPE;
Assess
Crystal structure of HIV-1 LM/HT Clade A/E CRF01 gp120 core in complex with (S)-MCG-IV-031-A05.	6onh SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-352	10×NAG; 1×MWD; 1×EPE;
Assess
Crystal Structure of HIV-1 LM/HT Clade A/E CRF01 GP120 Core in Complex with ZXC-I-090	8gcz SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-352	12×NAG; 1×YZI; 1×EPE;
Assess
Crystal structure of HIV-1 LM/HT Clade A/E CRF01 gp120 core in complex with (S)-MCG-III-027-D05.	6onv SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-352	10×NAG; 1×MWA; 1×EPE;
Assess
Crystal Structure of HIV-1 LM/HT Clade A/E CRF01 GP120 Core in Complex with TFH-I-116-D1	8gjt SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	2-353	10×NAG; 1×ZNF; 1×EPE; 1×CL;
Assess

1 SWISS-MODEL model

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
7lx2.1.A	monomer	0.76	1-353		80.17
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

A0A0M3KKW9 (A0A0M3KKW9_9HIV1) Human immunodeficiency virus 1

clade A/E 93TH057 HIV-1 gp120 core UniProtKBInterProInteractive Modelling

Available Structures

57 Experimental Structures

1 SWISS-MODEL model

Alignments

Background

Resolution

clade A/E 93TH057 HIV-1 gp120 core UniProtKB InterPro Interactive Modelling