A0AAD2ICM9 | SWISS-MODEL Repository

A0AAD2ICM9 (A0AAD2ICM9_MYCTX) Mycobacterium tuberculosis

DNA-directed RNA polymerase subunit beta UniProtKB InterPro Interactive Modelling

1178 aa; Sequence (Fasta) ; 4 identical sequences: Mycobacterium tuberculosis: P9WGY9, P9WGY8; Mycobacterium bovis: A1KGE7, P0A681

It is possible new templates exist for this target since these models were created.

Available Structures

71 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Mycobacterium tuberculosis RNA polymerase holoenzyme with ECF sigma factor sigma H	5zx3 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	23-1163	100.0	2×ZN;
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M. tuberculosis RNAP elongation complex with NusG	8eot SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WIU9;	30-1169	100.0	1×MG; 2×ZN;
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M. tuberculosis RNAP elongation complex with NusG and CMPCPP	8eos SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WIU9;	30-1169	100.0	1×2TM; 2×MG; 2×ZN;
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M. tuberculosis RNAP pause escaped complex with Bacillus subtilis NusG and GMPCPP	8ej3 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; Q06795;	30-1169	100.0	1×G2P; 2×MG; 2×ZN;
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Mycobacterium tuberculosis transcription initiation complex with ECF sigma factor sigma H and 6nt R…	6jcx SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	27-1165	100.0	2×ZN; 1×MG;
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Mycobacterium tuberculosis RNA polymerase transcription initiation open complex with a chimeric ECF…	6jcy SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGG7; P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	23-1161	100	2×ZN; 1×MG;
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Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 7 nt	6koo SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	27-1164	100.0	2×ZN; 1×MG;
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Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 9 nt	6kop SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	27-1164	100	2×ZN; 1×MG;
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Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 10 nt	6koq SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	27-1164	100	2×ZN; 1×MG;
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Mycobacterium tuberculosis RNA polymerase transcription initiation complex with ECF sigma factor si…	5zx2 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1164	100	2×ZN;
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Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 5 nt	6kon SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH9; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	27-1160	100.0	2×ZN; 1×MG;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L…	6dvc SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	2×ZN;
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Mycobacterium tuberculosis RNA polymerase sigma L holoenzyme open promoter complex containing TNP-2…	7rwi SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	1×7US;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3 nt of…	5uh5 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	2×ZN; 1×MG;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3nt RNA…	5uhc SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	1×RFP; 2×ZN; 1×MG;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L…	6dvb SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	2×ZN;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L…	6dv9 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	1×MG; 2×ZN;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF selenomethioni…	6dve SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	2×ZN;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2ntRNA …	5uh6 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	1×RFP; 2×ZN; 1×MG;
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Mycobacterium tuberculosis RNA polymerase sigma A holoenzyme open promoter complex containing UMN-7	7u22 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	1×KYO; 2×ZN; 1×MG;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L…	6dvd SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	2×ZN;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex	5uha SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	2×ZN; 1×MG;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-…	5uhg SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	1×RFP; 2×ZN; 1×MG; 1×88G;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 4nt RNA…	5uhd SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	1×RFP; 2×ZN; 1×MG;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-…	5uhe SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	2×ZN; 1×MG; 1×88G;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 4nt RNA	5uh8 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	2×ZN; 1×MG;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with Ri…	5uhb SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	1×RFP; 2×ZN; 1×MG;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-…	5uhf SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	2×ZN; 1×MG; 1×88D;
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Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2nt RNA	5uh9 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1153	100	2×ZN; 1×MG;
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Mycobacterium tuberculosis paused transcription complex with Bacillus subtilis NusG	8ehq SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; Q06795;	30-1151	100	1×MG; 2×ZN;
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Mycobacterium tuberculosis transcription elongation complex with Bacillus subtilis NusG (EC_LG)	8eoe SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; Q06795;	30-1151	100.0	1×MG; 2×ZN;
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Mycobacterium tuberculosis transcription elongation complex with Bacillus subtilis NusG (EC_PG)	8eof SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; Q06795;	30-1151	100.0	1×MG; 2×ZN;
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Protomeric substructure from an octameric assembly of M. tuberculosis RNA polymerase in complex wit…	7zf2 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1149	100	2×ZN; 1×MG;
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M. tuberculosis RNAP paused complex with B. subtilis NusG and GMPCPP	8exy SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; Q06795;	30-1151	100.0	1×MG; 2×ZN; 1×G2P;
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Crystal structure of MTB sigma L transcription initiation complex with 9 nt long RNA primer	6tyg SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1146	100.0
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Crystal structure of MTB sigma L transcription initiation complex with 5 nt long RNA primer	6tye SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1146	100.0
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Crystal structure of MTB sigma L transcription initiation complex with 6 nt long RNA primer	6tyf SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGH5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1146	100.0
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Single particle cryo em structure of Mycobacterium tuberculosis RNA polymerase in complex with Fida…	6fbv SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	28-1145	100	2×ZN; 1×MG; 1×FI8;
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Mycobacterium tuberculosis RNAP elongation complex	8e95 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	26-1139	100.0	2×ZN; 1×MG;
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Mycobacterium tuberculosis RNAP elongation complex with NusG transcription factor	8e82 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WIU9;	26-1139	100.0	2×ZN; 1×MG;
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Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase holoenzyme dimer comprising sigma fa…	7q59 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	29-1140	100	4×ZN; 2×MG;
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Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase holoenzyme octamer comprising sigma …	7q4u SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	29-1140	100	16×ZN; 8×MG;
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Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase core	7z8q SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	29-1140	100.0	2×ZN; 1×MG;
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Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase holoenzyme comprising sigma factor S…	7pp4 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI5; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	29-1140	100	2×ZN; 1×MG;
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Mtb RNAP Holo/RbpA/double fork DNA -closed clamp	6c04 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5;	30-1140	100	2×ZN; 1×MG;
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Cryo-EM structure of Mycobacterium tuberculosis transcription initiation complex with transcription…	8hih SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer O53830; P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	30-1140	100	2×ZN; 1×MG;
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Mycobacterium tuberculosis WT RNAP transcription open promoter complex with WhiB7 transcription fac…	7kif SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; Q6MX01;	30-1140	100	2×ZN; 1×MG; 1×SF4;
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Mycobacterium tuberculosis RNAP Holo/RbpA in relaxed state	6c05 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5;	30-1140	100	2×ZN; 1×MG;
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Mycobacterium tuberculosis WT RNAP transcription closed promoter complex with WhiB7 transcription f…	7kim SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; Q6MX01;	30-1140	100	2×ZN; 1×MG; 1×SF4;
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Mycobacterium tuberculosis RNAP promoter unwinding intermediate complex with RbpA/CarD and AP3 prom…	6eec SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	100	1×C0L; 2×ZN; 1×MG;
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Mycobacterium tuberculosis RNAP promoter unwinding intermediate complex with RbpA/CarD and AP3 prom…	6ee8 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	100	2×ZN; 1×MG;
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Mycobacterium tuberculosis WT RNAP transcription open promoter complex with WhiB7 promoter	7kin SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	100	2×ZN; 1×MG;
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Mtb RNAP Holo/RbpA/Fidaxomicin/upstream fork DNA	6bzo SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5;	30-1140	100	1×FI8; 2×ZN; 1×MG;
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Mycobacterium tuberculosis WT RNAP transcription initiation intermediate structure with Sorangicin	6vvx SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	100	1×SRN; 2×ZN; 1×MG;
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Mycobacterium tuberculosis WT RNAP transcription open promoter complex with Sorangicin	6vvy SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	100	1×SRN; 2×ZN; 1×MG;
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Mycobacterium tuberculosis RNAP S456L mutant transcription initiation intermediate structure with S…	6vvz SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	99.91	1×SRN; 2×ZN; 1×MG;
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Mycobacterium tuberculosis RNAP with RbpA/us fork and Corallopyronin	6m7j SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5;	30-1140	100	2×ZN; 1×MG; 1×C0L;
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Mycobacterium tuberculosis RNAP open promoter complex with RbpA/CarD and AP3 promoter	6edt SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	100	2×ZN; 1×MG;
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Mycobacterium tuberculosis RNAP Holo/RbpA/Fidaxomicin	6c06 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5;	30-1140	100	2×ZN; 1×MG; 1×FI8;
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Mycobacterium tuberculosis RNAP S456L mutant open promoter complex	6vw0 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3;	30-1140	99.91	2×ZN; 1×MG;
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Mycobacterium tuberculosis RNAP paused elongation complex with Escherichia coli NusG transcription …	8e79 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P0AFG0; P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	30-1139	100.0	2×ZN; 1×MG;
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Mycobacterium tuberculosis RNAP paused elongation complex with NusG transcription factor	8e74 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1; P9WIU9;	30-1139	100	2×ZN; 1×MG;
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Mycobacterium tuberculosis RNAP paused elongation complex	8e8m SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY5; P9WGY7; P9WGY9; P9WGZ1;	30-1139	100	2×ZN; 1×MG;
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Structure of the Mtb CarD/RNAP Beta subunit B1-B2 domains complex	4kbm SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGY9; P9WJG3;	53-432	100
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Fe-S cluster-bound transcription activator WhiB7 in complex with the SigmaAr4-RNAP Beta flap tip ch…	7kug SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY9; Q6MX01;	815-829	100	1×SF4;
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WhiB6 bound to the SigmaAr4-RNAP Beta flap tip chimera	8d5v SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WF37; P9WGI1; P9WGY9;	815-829	100	1×SF4;
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Complex structure of WhiB3 and the SigmaAr4-RNAP Beta flap tip chimera in space group R3	8cwr SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WF41; P9WGI1; P9WGY9;	815-827	100	3×SF4; 6×SO4; 3×TRS; 9×NI;
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Transcription activation subcomplex with WhiB7 bound to SigmaAr4-RNAP Beta flap tip chimera and DNA	7kuf SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WGI1; P9WGY9; Q6MX01;	815-827	100	1×SF4;
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Complex structure of WhiB3 and the SigmaAr4-RNAP Beta flap tip chimera in space group P43212	8cwt SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WF41; P9WGI1; P9WGY9;	815-826	100	3×SF4; 25×SO4; 7×NI; 3×TRS;
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WhiB3 bound to SigmaAr4-RNAP Beta flap tip chimera and DNA	8cyf SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P9WF41; P9WGI1; P9WGY9;	815-826	100	1×SF4; 1×CAC;
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Structure of Mtb RNAP Beta subunit B1 and B2 domains	4kbj SMTL PDBe PDBe-KB PDBj PDBsum RCSB	homo-2-mer	53-431	100.0
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	7p5x.1.C	monomer	0.86	21-1150		91.79
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

A0AAD2ICM9 (A0AAD2ICM9_MYCTX) Mycobacterium tuberculosis

DNA-directed RNA polymerase subunit beta UniProtKBInterProInteractive Modelling

Available Structures

71 Experimental Structures

1 SWISS-MODEL model

Alignments

Background

Resolution

DNA-directed RNA polymerase subunit beta UniProtKB InterPro Interactive Modelling