A1A316 (RPOC_BIFAA) Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 /E194a)

DNA-directed RNA polymerase subunit beta' UniProtKBInterProInteractive Modelling

1337 aa; Sequence (Fasta) Identical sequences: Bifidobacterium adolescentis: A0A174A7N0

Sequence Features

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 60Zinc 1
 62Zinc 1
 75Zinc 1
 78Zinc 1
 536Magnesium
 538Magnesium
 540Magnesium
 895Zinc 2
 974Zinc 2
 981Zinc 2
 984Zinc 2
 6-418RNA polymerase Rpb1, domain 1
IPR007080PF04997
 420-469RNA polymerase, alpha subunit
IPR000722PF00623
 468-561RNA polymerase, alpha subunit
IPR000722PF00623
 565-740RNA polymerase Rpb1, domain 3
IPR007066PF04983
 770-835RNA polymerase Rpb1, domain 4
IPR007083PF05000
 847-1213RNA polymerase Rpb1, domain 5
IPR007081PF04998

Sequence Alignments

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -1.55 6c04.1.D1-1279
63.39ZN;
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monomer -1.57 5vi5.1.F4-1279
63.28ZN;
Assess
monomer -4.61 4xlr.1.D5-1269
50.12MG;
Assess