A1REA8 (RPOC_SHESW) Shewanella sp (strain W3-18-1)
DNA-directed RNA polymerase subunit beta' UniProtKBInterProInteractive Modelling
1405 aa; Sequence (Fasta) Identical sequences: Shewanella putrefaciens: E6XQ82; A4YBY9
It is possible new templates exist for this target since these models were created.
Sequence Features
| 70 | Zinc 1 | ||
| 72 | Zinc 1 | ||
| 85 | Zinc 1 | ||
| 88 | Zinc 1 | ||
| 460 | Magnesium | ||
| 462 | Magnesium | ||
| 464 | Magnesium | ||
| 814 | Zinc 2 | ||
| 888 | Zinc 2 | ||
| 895 | Zinc 2 | ||
| 898 | Zinc 2 | ||
| 15-342 | RNA polymerase Rpb1, domain 1 IPR007080PF04997 | ||
| 344-380 | RNA polymerase, alpha subunit IPR000722PF00623 | ||
| 389-485 | RNA polymerase, alpha subunit IPR000722PF00623 | ||
| 489-644 | RNA polymerase Rpb1, domain 3 IPR007066PF04983 | ||
| 674-763 | RNA polymerase Rpb1, domain 4 IPR007083PF05000 | ||
| 766-1315 | RNA polymerase Rpb1, domain 5 IPR007081PF04998 |
Sequence Alignments
Homology models
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Report | Download | Assess |
|---|---|---|---|---|---|---|---|---|
| monomer | 2×ZN; | -4.09 | 5nwt.1.D | 80.56 |