A1VAJ5 (RPOC_DESVV) Desulfovibrio vulgaris subsp vulgaris (strain DP4)
DNA-directed RNA polymerase subunit beta' UniProtKBInterProInteractive Modelling
1385 aa; Sequence (Fasta) Identical sequences: Desulfovibrio vulgaris: Q727C6; Desulfovibrio desulfuricans: A0A4Y3TBH1; Desulfovibrio vulgaris: A0A0E0T5M8
It is possible new templates exist for this target since these models were created.
Sequence Features
| 75 | Zinc 1 | ||
| 77 | Zinc 1 | ||
| 90 | Zinc 1 | ||
| 93 | Zinc 1 | ||
| 466 | Magnesium | ||
| 468 | Magnesium | ||
| 470 | Magnesium | ||
| 809 | Zinc 2 | ||
| 883 | Zinc 2 | ||
| 890 | Zinc 2 | ||
| 893 | Zinc 2 | ||
| 21-348 | RNA polymerase Rpb1, domain 1 IPR007080PF04997 | ||
| 350-402 | RNA polymerase, alpha subunit IPR000722PF00623 | ||
| 397-491 | RNA polymerase, alpha subunit IPR000722PF00623 | ||
| 495-638 | RNA polymerase Rpb1, domain 3 IPR007066PF04983 | ||
| 667-756 | RNA polymerase Rpb1, domain 4 IPR007083PF05000 | ||
| 761-1300 | RNA polymerase Rpb1, domain 5 IPR007081PF04998 |
Sequence Alignments
Homology models
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Report | Download | Assess |
|---|---|---|---|---|---|---|---|---|
| monomer | -4.71 | 5ms0.1.F | 59.75 |