C5H431 (POLG_WSLV) Wesselsbron virus (WSLV)

Genome polyprotein UniProtKBInterProInteractive Modelling

3405 aa; Sequence (Fasta)

Sequence Features

 1531Charge relay system; for serine protease NS3 activity
 1555Charge relay system; for serine protease NS3 activity
 1616Charge relay system; for serine protease NS3 activity
 2560For 2'-O-MTase activity
 2645For 2'-O-MTase activity
 2681For 2'-O-MTase activity
 2717For 2'-O-MTase activity
 2938Zinc 1
 2942Zinc 1; via tele nitrogen
 2947Zinc 1
 2950Zinc 1
 3215Zinc 2; via tele nitrogen
 3231Zinc 2
 3350Zinc 2
 1940Involved in NS3 ATPase and RTPase activities
 1943Involved in NS3 ATPase and RTPase activities
 2512mRNA cap binding
 2515mRNA cap binding; via carbonyl oxygen
 2516mRNA cap binding
 2518mRNA cap binding; via carbonyl oxygen
 2523mRNA cap binding
 2527mRNA cap binding
 2560Essential for 2'-O-methyltransferase activity
 2645Essential for 2'-O-methyltransferase and N-7 methyltransferase activity
 2649mRNA cap binding
 2681Essential for 2'-O-methyltransferase activity
 2712mRNA cap binding
 2714mRNA cap binding
 2717Essential for 2'-O-methyltransferase activity
 100-120Helical
 240-260Helical
 266-280Helical
 721-741Helical
 750-770Helical
 1127-1147Helical
 1185-1205Helical
 1284-1304Helical
 1351-1371Helical
 1374-1394Helical
 1451-1471Helical
 2155-2175Helical
 2182-2200Helical
 2202-2222Helical
 2235-2255Helical; Note=Signal for NS4B
 2287-2307Helical
 2356-2376Helical
 2420-2440Helical
 2469-2489Helical
 1677-1684ATP
 99-100Cleavage; by viral protease NS3
 116-117Cleavage; by host signal peptidase
 205-206Cleavage; by host furin
 280-281Cleavage; by host signal peptidase
 770-771Cleavage; by host signal peptidase
 1123-1124Cleavage; by host
 1349-1350Cleavage; by viral protease NS3
 1479-1480Cleavage; by autolysis
 2102-2103Cleavage; by autolysis
 2228-2229Cleavage; by viral protease NS3
 2251-2252Cleavage; by host signal peptidase
 2499-2500Cleavage; by viral protease NS3
 283-310
 340-401
 340-396
 354-385
 372-401
 372-396
 462-560
 577-607
 774-785
 825-913
 949-994
 1051-1100
 1062-1084
 1083-1087
 9-114Flavivirus capsid protein C
IPR001122PF01003
 127-203Flavivirus polyprotein propeptide
IPR002535PF01570
 209-280Envelope glycoprotein M, flavivirus
IPR000069PF01004
 282-571Flavivirus glycoprotein central and dimerisation domain
IPR011998PF00869
 574-667Flavivirus glycoprotein E, immunoglobulin-like domain
IPR027287PF02832
 773-1125Flavivirus non-structural protein NS1
IPR001157PF00948
 1134-1318Flavivirus non-structural protein NS2A
IPR000752PF01005
 1354-1479Flavivirus non-structural protein NS2B
IPR000487PF01002
 1498-1648Flavivirus NS3, petidase S7
IPR001850PF00949
 1668-1813DEAD box, Flavivirus
IPR011492PF07652
 2107-2246Flavivirus non-structural protein NS4A
IPR000404PF01350
 2252-2492Flavivirus non-structural protein NS4B
IPR001528PF01349
 2554-2722Ribosomal RNA methyltransferase FtsJ domain
IPR002877PF01728
 2753-3393RNA-directed RNA polymerase, flavivirus
IPR000208PF00972

Sequence Alignments

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer ZN;-1.376qsn.2.A2505-3393
68.51
monomer ZN;-1.965jjs.1.A2504-3387
60.56
monomer MN;-1.872whx.1.A1501-2102
50.49
monomer -1.645yw1.1.A1483-2102
50.49
monomer -3.742wv9.1.A1402-2101
51.51