E6PBK6 (E6PBK6_9CHLO) Polytomella parva
Mitochondrial ATP synthase subunit delta UniProtKBInterProInteractive Modelling
199 aa; Sequence (Fasta) ;
1 identical sequence: Polytomella sp. Pringsheim 198.80: D7P7X6
It is possible new templates exist for this target since these models were created.
Available Structures
46 Experimental Structures
Description | PDB ID | Oligo-state | Range | Ligands | ||
---|---|---|---|---|---|---|
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2A, focussed refinement of F1 head… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3C, monomer-masked refinement |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
CryoEM structure of Polytomella F-ATP synthase, Rotary substate 1A, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
CryoEM structure of Polytomella F-ATP synthase, Primary rotary state 1, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2D, monomer-masked refinement |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1B, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1C, focussed refinement of F1 head… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Primary rotary state 3, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1D, focussed refinement of F1 head… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3C, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2D, focussed refinement of F1 head… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1A, monomer-masked refinement |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2B, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1A, focussed refinement of F1 head… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1C, monomer-masked refinement |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1D, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2A, monomer-masked refinement |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2C, monomer-masked refinement |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2B, monomer-masked refinement |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1B, monomer-masked refinement |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
CryoEM structure of Polytomella F-ATP synthase, Primary rotary state 2, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3A, monomer-masked refinement |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
CryoEM structure of Polytomella F-ATP synthase, Full dimer, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 2×ZN; 6×ATP; 10×MG; 4×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2B, focussed refinement of F1 head… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1F, focussed refinement of F1 head… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
CryoEM structure of Polytomella F-ATP synthase, Primary rotary state 3, focussed refinement of F1 h… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3A, focussed refinement of F1 head… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2C, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1F, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2A, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
CryoEM structure of Polytomella F-ATP synthase, Primary rotary state 2, focussed refinement of F1 h… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3B, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1E, monomer-masked refinement |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3C, focussed refinement of F1 head… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1F, monomer-masked refinement |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3B, monomer-masked refinement |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2C, focussed refinement of F1 head… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1C, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1E, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1E, focussed refinement of F1 head… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
CryoEM structure of Polytomella F-ATP synthase, Primary rotary state 1, focussed refinement of F1 h… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3A, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 2D, composite map |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1B, focussed refinement of F1 head… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1D, monomer-masked refinement |
Heteromer A0A024FSR7; A0A5H1ZR73; A0A5H1ZR74; A0A5H1ZR95; A0ZW40; A0ZW41; D7NIZ2; D7P6B9; D7P7X5; D7P7X6; D7P897; D8V7I1; D8V7I2; D8V7I7; H8PGG3; K0J903; Q4LDE7; Q85JD5; | 1×ZN; 3×ATP; 5×MG; 2×ADP; | ||||
Assess | ||||||
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 3B, focussed refinement of F1 head… |
Heteromer A0A5H1ZR74; A0ZW40; A0ZW41; D7P7X5; D7P7X6; D8V7I1; Q4LDE7; | 3×ATP; 5×MG; 2×ADP; | ||||
Assess |
1 SWISS-MODEL model
Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
---|---|---|---|---|---|---|
6rdw.1.X | monomer | 0.86 | 100.00 | |||
Assess |