F8W4B7 (F8W4B7_DANRE) Danio rerio (Zebrafish) (Brachydanio rerio)
Histone deacetylase 6 UniProtKBInterProSTRINGInteractive Modelling
1081 aa; Sequence (Fasta)
It is possible new templates exist for this target since these models were created.
Available Structures
76 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Ligands | ||
|---|---|---|---|---|---|---|
| Crystal structure of Danio rerio HDAC6 CD1 and CD2 (linker intact) in complex with Nexturastat A | monomer | 2×CL; 1×ZN; 5×K; 1×N4R; | ||||
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| Crystal structure of ligand-free Danio rerio HDAC6 CD1 CD2 | monomer | 1×PRO; 4×K; 1×ZN; 6×GOL; | ||||
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| Crystal structure of Danio rerio HDAC6 CD1 and CD2 (linker cleaved) in complex with Nexturastat A | monomer | 2×ZN; 4×K; 2×N4R; 1×CL; 1×EDO; | ||||
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| Crystal structure of Danio rerio HDAC6 CD1 in complex with trichostatin A | monomer | 1×ZN; 2×NA; 5×CL; 1×TSN; | ||||
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| Crystal structure of Danio rerio HDAC6 CD2 in complex with (S)- trichostatin A | monomer | 1×E1Z; 2×K; 1×ZN; 10×EDO; | ||||
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| Ultrahigh resolution crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in c… | monomer | 1×ZN; 1×TSN; 2×K; 3×CL; 9×EDO; 3×GOL; 2×PEG; 1×MG; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with ACY-1083 | monomer | 1×ZN; 2×K; 1×AH7; 11×EDO; 1×PGE; 1×PEG; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with KV70 | monomer | 1×ZN; 2×K; 1×K70; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) K330L mutant comple… | monomer | 3×EDO; 1×ZN; 2×K; 1×QCM; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) Y363F mutant comple… | monomer | 1×QCP; 1×EDO; 1×ZN; 2×K; | ||||
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| HDAC6 selective degraded (difluoromethyl)-1,3,4-oxadiazole substrate inhibitor | monomer | 2×K; 1×ZN; 1×UTO; 4×IOD; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) K330L mutant comple… | monomer | 1×PHE; 1×ZN; 2×K; 1×P7D; 1×EDO; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with trichosta… | monomer | 1×ZN; 2×K; 1×TSN; 26×IOD; 6×NH4; 1×CL; 1×GOL; 2×EDO; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with ricolinos… | monomer | 1×ZN; 2×K; 1×AH4; 7×EDO; 1×PEG; 1×FLC; | ||||
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| Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with inhibitor … | monomer | 1×YJ5; 3×EDO; 1×ZN; 2×K; 1×EOH; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with HPOB | monomer | 1×ZN; 2×K; 1×5OJ; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 in complex with trichosta… | monomer | 1×ZN; 1×TSN; 2×NH4; 1×SO4; 1×EDO; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with Resminostat | monomer | 1×ZN; 2×K; 1×P7D; 3×EDO; 4×IOD; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) complexed with AR-42 | monomer | 1×ZN; 2×K; 1×QCP; 3×EDO; | ||||
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| X-ray structure of the Danio rerio histone deacetylase 6 (HDAC6; catalytic domain 2) in complex wit… | monomer | 1×ZN; 3×K; 2×EDO; 2×PEG; 2×SCN; 1×NA; 1×GOL; 1×N9W; | ||||
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| X-ray structure of Danio rerio histone deacetylase 6 (HDAC6) CD2 in complex with an inhibitor SW101 | monomer | 1×ZN; 1×QRB; 2×GOL; 2×K; 2×SCN; | ||||
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| X-ray structure of Danio rerio histone deacetylase 6 (HDAC6) CD2 in complex with a inhibitor SS208 | monomer | 1×ZN; 2×K; 1×JNN; 8×SCN; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) Y363F mutant comple… | monomer | 1×ZN; 2×K; 1×TSN; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with SAHA | monomer | 1×ZN; 2×K; 1×SHH; 2×GOL; 1×EDO; 3×CL; 1×MG; | ||||
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| X-ray structure of Danio rerio histone deacetylase 6 (HDAC6) CD2 in complex with an inhibitor CPD11… | monomer | 1×ZN; 2×K; 1×QXF; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) K330L mutant comple… | monomer | 1×ZN; 2×K; 1×QCP; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with NR160 | monomer | 1×P5Y; 2×EDO; 1×ZN; 2×K; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with YX-153 | monomer | 1×ZN; 2×K; 1×P6Y; | ||||
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| X-ray structure of Danio rerio histone deacetylase 6 (HDAC6) CD2 in complex with a inhibitor SS555 | monomer | 1×ZN; 2×K; 1×N28; 5×EDO; 1×TOE; 1×GOL; 1×CL; | ||||
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| Crystal structure of Danio rerio HDAC6 CD2 in complex with in situ enzymatically hydrolyzed DFMO-ba… | monomer | 1×LDL; 1×ZN; 2×K; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with NN-390 | monomer | 1×O2L; 1×ZN; 2×K; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with phenylhyd… | monomer | 1×ZN; 2×K; 1×BHO; 8×EDO; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) complexed with Tric… | monomer | 1×ZN; 2×K; 1×TSN; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with cyclopent… | monomer | 1×ZN; 2×K; 1×FBJ; 6×EDO; | ||||
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| Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with cyclopepti… | monomer | 1×ZN; 2×K; 2×EDO; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with HC toxin | monomer | 1×ZN; 2×K; 1×GOL; 2×NO3; 3×EDO; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with AP-1-62-A | monomer | 1×ZN; 2×K; 1×A6I; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with JS28 | monomer | 1×ZN; 2×K; 1×P7V; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with JR005 | monomer | 1×ZN; 2×K; 1×P7J; 1×CL; 2×NO3; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 (H574A) in complex with h… | monomer | 1×ZN; 2×K; 2×EDO; 1×MCM; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with HPB | monomer | 11×IOD; 1×ZN; 3×K; 1×AGJ; 14×EDO; 1×PEG; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with TO-317 | monomer | 1×TO3; 2×EDO; 3×FMT; 1×ZN; 3×K; | ||||
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| Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with a mercapt… | monomer | 1×ZN; 2×K; 1×W45; 1×PEG; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 (CD2) complexed with fluo… | monomer | 1×ACT; 1×M0I; 1×ZN; 2×K; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with belinostat | monomer | 2×K; 1×ZN; 1×5OG; | ||||
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| Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with inhibitor … | monomer | 1×YIZ; 1×ZN; 2×K; 3×EDO; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with ITF3756 | monomer | 1×UZW; 1×ZN; 2×K; 3×IOD; 2×GOL; 1×PEG; 2×EDO; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) K330L mutant comple… | monomer | 1×ZN; 2×K; 1×UFJ; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 (CD2) complexed with NF23… | monomer | 1×ZN; 2×K; 1×QQD; 1×EDO; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 (CD2) complexed with NF26… | monomer | 1×ZN; 2×K; 1×QQG; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with DDK-137 | monomer | 1×ZN; 2×K; 1×HB7; 2×EDO; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with acetate | monomer | 1×ZN; 2×K; 1×ACT; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with ITF3985 | monomer | 1×V05; 1×ZN; 6×IOD; 2×K; 1×PEG; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) H82F F202Y double m… | monomer | 1×ZN; 2×K; 1×TSN; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 1 (CD1) K330L mutant comple… | monomer | 1×ZN; 2×K; 1×UFS; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with oxamflatin | monomer | 1×ZN; 2×K; 1×5OK; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with panobinos… | monomer | 1×ZN; 2×K; 1×LBH; 1×GOL; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with cyclohexe… | monomer | 1×ZN; 2×K; 3×CL; 1×FBM; 10×EDO; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with DDK-122 | monomer | 1×ZN; 2×K; 1×HBJ; 1×EDO; | ||||
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| Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with fluorinate… | monomer | 1×QI8; 1×ZN; 2×K; | ||||
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| Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with fluorinate… | monomer | 1×QHX; 1×ZN; 2×K; | ||||
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| Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with fluorinate… | monomer | 1×QHO; 1×ZN; 2×K; | ||||
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| Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with fluorinate… | monomer | 1×ZN; 2×K; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 (Y745F mutant) in complex… | monomer | 1×ZN; 2×K; 1×GOL; 1×PEG; 1×NO3; 1×EDO; 1×MCM; | ||||
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| Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with fluorinate… | monomer | 1×QI5; 1×ZN; 2×K; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with RTS-V5 | monomer | 1×ZN; 2×K; 1×FGY; 5×EDO; | ||||
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| Crystal Structure of Danio rerio Histone Deacetylase 6 Catalytic Domain 2 (CD2) Complexed with Bish… | monomer | 1×ZN; 2×K; 1×R5G; 2×EDO; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with Bavarostat | monomer | 1×ZN; 2×K; 1×PRO; 1×HBV; 8×EDO; | ||||
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| Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with cyclopepti… | monomer | 1×ZN; 2×K; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 | monomer | 1×ZN; 2×K; 1×NA; 1×FMT; | ||||
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| Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with DMFO Inhib… | monomer | 1×Z4I; 1×ZN; 2×K; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with cyclohexy… | monomer | 1×ZN; 2×K; 1×F9P; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with DDK-115 | monomer | 1×ZN; 2×K; 1×HBG; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with trifluoro… | monomer | 1×ZN; 2×K; 1×FKS; 3×BR; | ||||
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| Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with (R)-Lipoic… | monomer | 1×RED; 1×ZN; 2×K; | ||||
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| Crystal structure of Danio rerio HDAC6 ZnF-UBP domain | monomer | 2×GLY; 3×ZN; 2×NI; | ||||
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2 SWISS-MODEL models
| Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 5g0j.1.A | monomer | 0.91 | 1×ZN; 5×K; 1×N4R; | 100.00 | ||
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| 3gv4.1.A | monomer | 0.80 | 3×ZN; | 59.05 | ||
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