H7GHA5 (H7GHA5_9DEIN) Thermus parvatiensis

Small ribosomal subunit protein uS9 UniProtKBInterProInteractive Modelling

128 aa; Sequence (Fasta) ; 4 identical sequences: Thermus thermophilus JL-18: H9ZQ78; Thermus thermophilus: F6DDF2, A0A3P4AMX7, P62669

Available Structures

27 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin Heteromer
P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P62669; P80339; P80340; P80371; P80372; P80373; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP7; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9Z9H5;
2-128
741×MG;PAR;ZN;
Assess
Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights in… Heteromer
P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P62669; P80339; P80340; P80371; P80372; P80373; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP6; Q5SLP7; Q5SLP8; Q5SLQ0; Q5SLQ1; Q5SM01; Q9Z9H5;
2-128
548×MG;ZN;
Assess
E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon Heteromer
P0A7I0; P60493; P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
1510×MG;ZN;
Assess
The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog Heteromer
P0DOY6; P0DOY9; P17291; P35871; P60339; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P62669; P80339; P80340; P80371; P80372; P80373; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP7; Q5SLP8; Q5SLQ0; Q9Z9H5;
2-128
PAR;ZN;GCP;MG;
Assess
X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric… Heteromer
P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
141×MG;SF4;
Assess
Structural basis for translation termination on the 70S ribosome. Heteromer
P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GS1; Q72GV5; Q72GW3; Q72HB8; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
1260×MG;ZN;
Assess
Thermus thermophilus 70S ribosome lacking ribosomal protein uS17 Heteromer
H7GHW0; P0AD49; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
MPD; 1306×MG;ARG;ZN;SF4;
Assess
Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-si… Heteromer
P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P62669; P80339; P80340; P80371; P80372; P80373; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP7; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9Z9H5;
2-128
741×MG;PAR;ZN;
Assess
Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome. Heteromer
P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GS1; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
595×MG;ZN;
Assess
Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70… Heteromer
P0A7I0; P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
727×MG;BLS;ZN;
Assess
Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosome Heteromer
P0A7I0; P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
896×MG;BLS;ZN;
Assess
Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2. Heteromer
P61941; P62238; P62442; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GJ6; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
1284×MG;ZN;
Assess
Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome. Heteromer
P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
BLS; 2050×MG;ZN;
Assess
70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, … Heteromer
P61941; P62238; P62442; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q5SHN5; Q5SHQ0; Q72G84; Q72GS2; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
FUA;GDP;MG;
Assess
Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA… Heteromer
P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P62669; P80339; P80340; P80371; P80372; P80373; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP7; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9WX76; Q9Z9H5;
2-128
741×MG;ZN;
Assess
Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- a… Heteromer
P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P62669; P80339; P80340; P80371; P80372; P80373; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP7; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9Z9H5;
2-128
673×MG;PAR;ZN;
Assess
Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribo… Heteromer
P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GS1; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
1169×MG;ZN;
Assess
70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and t… Heteromer
P61941; P62238; P62442; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q5SHN5; Q5SHQ0; Q72G84; Q72GS2; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
GNP;MG;
Assess
E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome Heteromer
P0A7I0; P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
826×MG;ZN;
Assess
Recognition of the amber stop codon by release factor RF1. Heteromer
P61941; P62238; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GS1; Q72GV5; Q72GW3; Q72HB8; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
250×MG;ZN;
Assess
IRES bound to bacterial Ribosome Heteromer
P61941; P62238; P62442; P62613; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q72G84; Q72GV5; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I16; Q72I19; Q72I20; Q72I22; Q72I23; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
ZN;
Assess
70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and … Heteromer
P61941; P62238; P62442; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q5SHN5; Q5SHQ0; Q72G84; Q72GS2; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
GNP;MG;
Assess
70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, … Heteromer
P61941; P62238; P62442; P62652; P62653; P62654; P62655; P62656; P62657; P62658; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669; P80340; Q5SHN5; Q5SHQ0; Q72G84; Q72GS2; Q72GV9; Q72GW3; Q72HR2; Q72HR3; Q72I04; Q72I05; Q72I06; Q72I07; Q72I09; Q72I11; Q72I12; Q72I14; Q72I15; Q72I19; Q72I20; Q72I22; Q72I23; Q72I28; Q72I33; Q72IA7; Q72IN1; Q72JR0; Q72JU9; Q72L76; Q72L77;
2-128
FUA;GDP;
Assess
Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17 Heteromer
P61941; P62238; P62613; P62653; P62654; P62655; P62656; P62657; P62659; P62660; P62661; P62662; P62663; P62664; P62665; P62666; P62667; P62668; P62669;
2-128
158×MG; 35×K;ZN;
Assess
CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH THE TRANSL… Heteromer
P0DOY6; P0DOY7; P0DOY9; P17291; P62669; P80371; P80372; P80373; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHQ5; Q5SIH3; Q5SJ76; Q5SJH3; Q5SKU2; Q5SLP8; Q5SLQ0;
2-128
75×MG; 12×WO2;ZN;
Assess
T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, … Heteromer
P17291; P35871; P36238; P60339; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P62669; P80339; P80340; P80341; P80371; P80372; P80373; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SLP7; Q5SLP8; Q5SLQ0; Q5SLQ1; Q72I28; Q9Z9H5;
2-128
PHA;GDP;MAU;BME;
Assess
Coordinates of the thermus thermophilus 30S components neighboring RbfA as obtained by fitting into… Heteromer
P61941; P62655; P62669;
2-128
Assess

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
2zm6.1.Imonomer0.744-128
100.00
Assess