N1P568 | SWISS-MODEL Repository

N1P568 (N1P568_YEASC) Saccharomyces cerevisiae (strain CENPK113-7D) (Baker's yeast)

Mediator of RNA polymerase II transcription subunit 20 UniProtKB Protein Atlas InterPro Interactive Modelling

210 aa; Sequence (Fasta) ; 1 identical sequence: Saccharomyces cerevisiae: P34162

It is possible new templates exist for this target since these models were created.

Available Structures

14 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Mediator-PIC Early (Core B)	7uif PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P07273; P08518; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P33308; P34087; P34162; P38304; P38633; P38782; P38902; P40422; P41895; P41896; P47822; Q06213; Q08278; Q12321; Q12343; Q99278;	1-210	100
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Mediator-PIC Early (Mediator A)	7uig PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P19263; P25046; P32569; P32570; P32585; P33308; P34162; P38304; P38633; P38782; P47822; Q06213; Q08278; Q12321; Q12343; Q99278;	1-210	100
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Core Mediator-PICearly (Copy A)	7ui9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P07273; P08518; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P33308; P34087; P34162; P38304; P38633; P38782; P38902; P40422; P41895; P41896; P47822; Q06213; Q08278; Q12321; Q12343; Q99278;	1-210	100
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Structure of the Mediator head subcomplex Med18/20	2hzm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P32585; P34162;	2-210	100.0	1×PO4;
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Structure of the Mediator Head Module from S. cerevisiae	4gwp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P32569; P32570; P32585; P34162; P38304; P38782; Q99278;	2-210	100
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Architecture of the Mediator Head module	3rj1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P32569; P32570; P32585; P34162; P38304; P38782; Q99278;	2-210	100.0	30×SE;
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Structure of the Mediator Head Module from S. cerevisiae in complex with the carboxy-terminal domai…	4gwq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P32569; P32570; P32585; P34162; P38304; P38782; Q99278;	2-210	100
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Yeast RNA polymerase II transcription pre-initiation complex with core Mediator and the +1 nucleoso…	8ceo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02281; P04050; P06839; P06897; P08518; P13393; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P32776; P33308; P34087; P34162; P36100; P36145; P38304; P38633; P38782; P38902; P40422; P41895; P41896; P47822; P62799; P84233; Q00578; Q02939; Q03290; Q04673; Q06213; Q08278; Q12004; Q12321; Q12343; Q3E7C1; Q99278;	2-210	100.0	1×SF4; 17×ZN; 1×MG;
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Cryo-EM map of a yeast minimal preinitiation complex interacting with the Mediator Head module	3j1o PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P32569; P32570; P32585; P34162; P38304; P38782; Q99278;	2-210	100.0
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Mediator-RNA Polymerase II Pre-Initiation Complex	5sva PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P33308; P34087; P34162; P35189; P36100; P36145; P38304; P38633; P38782; P38902; P40422; P41895; P41896; P47822; Q00578; Q02939; Q08278; Q12343; Q3E7C1; Q99278;	2-210	100	8×ZN; 1×MG;
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Yeast RNA polymerase II transcription pre-initiation complex with core Mediator	8cen PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P32776; P33308; P34087; P34162; P36100; P36145; P38304; P38633; P38782; P38902; P40422; P41895; P41896; P47822; Q00578; Q02939; Q03290; Q04673; Q06213; Q08278; Q12004; Q12321; Q12343; Q3E7C1; Q99278;	2-210	100.0	1×SF4; 17×ZN; 1×MG;
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Structure of the Mediator head submodule Med8C/18/20	2hzs PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P32585; P34162; P38304;	2-209	100.0
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STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH AND CORE MEDIATOR	5oqm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P32776; P33308; P34087; P34162; P36100; P36145; P38304; P38633; P38782; P38902; P40422; P41895; P41896; P47822; Q00578; Q02939; Q03290; Q04673; Q06213; Q08278; Q12004; Q12343; Q3E7C1; Q99278;	2-209	100.0	16×ZN; 1×MG; 1×SF4;
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Architecture of the RNA polymerase II-Mediator core transcription initiation complex	4v1o PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A0H2UKZ8; P04050; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32569; P32570; P32585; P34087; P34162; P38304; P38782; P38902; P40422; P41896; Q99278;	2-209	100.0	9×ZN; 1×MG;
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	7uio.47.A	monomer	0.79	1-210		100.00
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

N1P568 (N1P568_YEASC) Saccharomyces cerevisiae (strain CENPK113-7D) (Baker's yeast)

Mediator of RNA polymerase II transcription subunit 20 UniProtKBProtein AtlasInterProInteractive Modelling

Available Structures

14 Experimental Structures

1 SWISS-MODEL model

Alignments

Background

Resolution

Mediator of RNA polymerase II transcription subunit 20 UniProtKB Protein Atlas InterPro Interactive Modelling