O34816 (YKUD_BACSU) Bacillus subtilis (strain 168)
Putative L,D-transpeptidase YkuD UniProtKBInterProSTRINGInteractive Modelling
164 aa; Sequence (Fasta) ;
2 identical sequences: Bacillus subtilis subsp. subtilis str. SMY: A0A6H0HA98; Bacillus subtilis: A0A6M3ZKT6
It is possible new templates exist for this target since these models were created.
Available Structures
7 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Ligands | ||
|---|---|---|---|---|---|---|
| Ykud L,D-transpeptidase | homo-2-mer | 2×SO4; | ||||
| Assess | ||||||
| ykud from B.subtilis | homo-2-mer | 7×SO4; 2×CD; 2×CL; | ||||
| Assess | ||||||
| Crystal Structure of the B. subtilis YkuD protein at 2 A resolution | homo-2-mer | 2×CD; 4×SO4; | ||||
| Assess | ||||||
| Ykud L,D-transpeptidase from B.subtilis | homo-2-mer | 6×SO4; | ||||
| Assess | ||||||
| Haddock model of Bacillus subtilis L,D-transpeptidase in complex with a peptidoglycan hexamuropepti… | monomer | 1×AMU; | ||||
| Assess | ||||||
| NMR structure of the imipenem-acylated L,D-transpeptidase from Bacillus subtilis | monomer | 1×IM2; | ||||
| Assess | ||||||
| B. subtilis L,D-transpeptidase | monomer | |||||
| Assess | ||||||
1 SWISS-MODEL model
| Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 4a1i.1.A | homo-2-mer | 0.87 | 1×CD; | 98.78 | ||
| Assess | ||||||