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O88689 (PCDA4_MOUSE) Mus musculus (Mouse)

Protocadherin alpha-4 UniProtInterproInteractive Modelling

947 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; )

Sequence Features

 698-718Helical.
 96-102
 30-111Cadherin, N-terminal
IPR013164PF08266
 143-233Cadherin
IPR002126PF00028
 247-341Cadherin
IPR002126PF00028
 358-445Cadherin
IPR002126PF00028
 460-556Cadherin
IPR002126PF00028
 588-669Cadherin
IPR002126PF00028
 797-930Cadherin, C-terminal catenin-binding dom ain
IPR031904PF15974

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownload
Protocadherin alpha 4 extracellular cadherin domains 1-4homo-2-mer 18×CA;NAG;MAN;5dzw30-450
Structure of EC1 domain of CNRmonomer 1wuz27-129

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
monomer CA;-1.515szr.1.A239-672
45.50
homo-2-mer 20×CA;FUC;-2.055dzv.1.B30-557
84.18
monomer CA;-2.865szo.1.B29-449
46.75
monomer CA;-3.695dzv.1.B137-671
27.44

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
3monomerCA;-1.545szr.1.A239-672
45.50
2monomerCA;-1.624zpn.2.A24-345
45.31
2homo-2-mer18×CA;FUC;-1.765dzv.1.A30-534
83.37
3homo-2-mer20×CA;FUC;-2.055dzv.1.B30-557
84.18
2monomerCA;-2.855szo.1.B29-449
46.75
2monomerCA;-3.025dzy.3.A138-546
25.59
2monomerCA;-3.565szr.1.A239-586
43.84
3monomerCA;-4.205t9t.1.B137-674
26.45