O88689 (PCDA4_MOUSE) Mus musculus (Mouse)

Protocadherin alpha-4 UniProtInterproInteractive Modelling

947 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; )

Sequence Features

 698-718Helical.
 96-102
 30-111Cadherin, N-terminal
IPR013164PF08266
 143-233Cadherin
IPR002126PF00028
 247-341Cadherin
IPR002126PF00028
 358-445Cadherin
IPR002126PF00028
 460-556Cadherin
IPR002126PF00028
 588-669Cadherin
IPR002126PF00028
 797-930Cadherin, C-terminal catenin-binding dom ain
IPR031904PF15974

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownload
Protocadherin alpha 4 extracellular cadherin domains 1-4homo-2-mer 18×CA;NAG;MAN;5dzw30-450
Structure of EC1 domain of CNRmonomer 1wuz27-129

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
monomer CA;-1.644zpn.2.A24-345
45.31
monomer CA;-1.765szr.1.A239-665
47.39
homo-2-mer 20×CA;FUC;-2.005dzv.1.B30-557
84.18
monomer -3.995erp.1.A236-624
27.87
monomer CA;-4.173q2w.1.A178-570
29.58
monomer CA;-4.495szn.1.A293-686
35.81

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownload
2monomerCA;-1.624zpn.2.A24-345
45.31
3monomerCA;-1.644zpn.2.A24-345
45.31
3monomerCA;-1.755szr.1.A239-665
47.39
2homo-2-mer18×CA;FUC;-1.765dzv.1.A30-534
83.37
3homo-2-mer20×CA;FUC;-2.005dzv.1.B30-557
84.18
2monomerCA;-3.485szr.1.A239-586
43.84
3monomer-4.085erp.1.A236-624
27.87
2monomerCA;-4.083q2w.1.A178-526
28.40
3monomerCA;-4.163q2w.1.A178-570
29.58
3monomerCA;-4.455szn.1.A293-686
35.81