P03356 (POL_MLVAV) AKV murine leukemia virus (AKR (endogenous) murine leukemia virus)

Gag-Pol polyprotein UniProtKBInterProInteractive Modelling

1734 aa; Sequence (Fasta)

Sequence Features

 565Protease; shared with dimeric partner.
 808Magnesium; catalytic; for reverse transcriptase activity.
 882Magnesium; catalytic; for reverse transcriptase activity.
 883Magnesium; catalytic; for reverse transcriptase activity.
 1182Magnesium; catalytic; for RNase H activity.
 1220Magnesium; catalytic; for RNase H activity.
 1241Magnesium; catalytic; for RNase H activity.
 1311Magnesium.
 1454Magnesium; catalytic; for integrase activity.
 1513Magnesium; catalytic; for integrase activity.
 501-518CCHC-type.
 1386-1426HHCC-type.
 129-130Cleavage; by viral protease.
 214-215Cleavage; by viral protease.
 477-478Cleavage; by viral protease.
 533-534Cleavage; by viral protease.
 658-659Cleavage; by viral protease.
 1329-1330Cleavage; by viral protease.
 2-127Gamma-retroviral matrix protein
IPR000840PF01140
 130-214Gag polyprotein, inner coat protein p12
IPR002079PF01141
 225-432Core shell protein Gag P30
IPR003036PF02093
 502-518Zinc finger, CCHC-type
IPR001878PF00098
 548-639Retropepsins
IPR018061PF00077
 759-929Reverse transcriptase domain
IPR000477PF00078
 994-1090Reverse transcriptase/retrotransposon-de rived protein, RNase H-like domain
IPR041577PF17919
 1176-1318Ribonuclease H domain
IPR002156PF00075
 1340-1438Gag-Pol polyprotein, Zinc-finger like do main
IPR039464PF16721
 1445-1557Integrase, catalytic core
IPR001584PF00665
 1653-1731Murine leukemia virus integrase, C-termi nal
IPR040643PF18697

Sequence Alignments

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer -0.346hwy.1.B215-431
98.62
monomer -1.965dmq.1.A682-1321
95.99
monomer ZN;-2.433s3o.1.A1362-1710
26.73
monomer -2.633oym.1.B1442-1636
26.73