P0C6T5 (R1A_BCHK5) Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)
Replicase polyprotein 1a UniProtKBInterProInteractive Modelling
4481 aa; Sequence (Fasta)
Molecule Processing
| Non-structural protein 1 | |
| Non-structural protein 2 | |
| Non-structural protein 3 | |
| Non-structural protein 4 | |
| 3C-like proteinase | |
| Non-structural protein 6 | |
| Non-structural protein 7 | |
| Non-structural protein 8 | |
| Non-structural protein 9 | |
| Non-structural protein 10 | |
| Non-structural protein 11 |
It is possible new templates exist for this target since these models were created.
Sequence Features
| 1668 | For PL-PRO activity | ||
| 1838 | For PL-PRO activity | ||
| 3379 | For 3CL-PRO activity | ||
| 3486 | For 3CL-PRO activity | ||
| 4402 | Zinc 1 | ||
| 4405 | Zinc 1 | ||
| 4411 | Zinc 1 | ||
| 4418 | Zinc 1 | ||
| 4444 | Zinc 2 | ||
| 4447 | Zinc 2 | ||
| 4455 | Zinc 2 | ||
| 4457 | Zinc 2 | ||
| 2196-2216 | Helical | ||
| 2268-2288 | Helical | ||
| 2372-2392 | Helical | ||
| 2396-2416 | Helical | ||
| 2421-2441 | Helical | ||
| 2848-2868 | Helical | ||
| 3119-3139 | Helical | ||
| 3152-3172 | Helical | ||
| 3203-3223 | Helical | ||
| 3650-3670 | Helical | ||
| 3684-3704 | Helical | ||
| 3709-3729 | Helical | ||
| 3760-3777 | Helical | ||
| 3782-3802 | Helical | ||
| 3823-3843 | Helical | ||
| 3855-3875 | Helical | ||
| 1748-1785 | C4-type | ||
| 4402-4418 | |||
| 4444-4457 | |||
| 195-196 | Cleavage | ||
| 851-852 | Cleavage; by PL-PRO | ||
| 2830-2831 | Cleavage; by PL-PRO | ||
| 3338-3339 | Cleavage; by 3CL-PRO | ||
| 3644-3645 | Cleavage; by 3CL-PRO | ||
| 3936-3937 | Cleavage; by 3CL-PRO | ||
| 4019-4020 | Cleavage; by 3CL-PRO | ||
| 4218-4219 | Cleavage; by 3CL-PRO | ||
| 4328-4329 | Cleavage; by 3CL-PRO | ||
| 4467-4468 | Cleavage; by 3CL-PRO | ||
| 22-165 | Non-structural protein NSP1, betacoronavirus IPR021590PF11501 | ||
| 197-441 | Nonstructural protein 2, N-terminal domain, coronavirus IPR043615PF19211 | ||
| 679-851 | Non-structural protein 2, C-terminal domain, coronavirus IPR043613PF19212 | ||
| 1219-1321 | Macro domain IPR002589PF01661 | ||
| 1401-1474 | Non-structural protein NSP3, SUD-M domain, betacoronavirus IPR024375PF11633 | ||
| 1559-1876 | Peptidase C16, coronavirus IPR013016PF08715 | ||
| 1913-2018 | Non-structural protein NSP3, nucleic acid-binding (NAR) domain, betacoronavirus IPR032592PF16251 | ||
| 2319-2813 | Coronavirus replicase NSP3, C-terminal IPR043611PF19218 | ||
| 2862-3216 | Coronavirus replicase NSP4, N-terminal IPR043612PF19217 | ||
| 3246-3336 | Non-structural protein NSP4, C-terminal, coronavirus IPR032505PF16348 | ||
| 3367-3657 | Peptidase C30, coronavirus IPR008740PF05409 | ||
| 3672-3936 | Non-structural protein 6, coronavirus IPR043610PF19213 | ||
| 3937-4019 | Non-structural protein NSP7, coronavirus IPR014828PF08716 | ||
| 4022-4213 | Non-structural protein NSP8, coronavirus-like IPR014829PF08717 | ||
| 4219-4328 | Non-structural protein NSP9, coronavirus IPR014822PF08710 | ||
| 4338-4458 | RNA synthesis protein NSP10, coronavirus IPR018995PF09401 |
Sequence Alignments
Non-structural protein 3 852-2830; PRO_0000338101
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | 1×ZN; | -1.12 | 5v69.1.A | 62.85 | |
| Assess | |||||
| monomer | 1×ZN; | -4.39 | 4ypt.1.A | 30.08 | |
| Assess | |||||
3C-like proteinase 3339-3644; PRO_0000338103
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | -1.07 | 4yog.1.B | 83.66 | ||
| Assess | |||||
Non-structural protein 8 4020-4218; PRO_0000338106
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | -1.55 | 7c2k.1.B | 51.78 | ||
| Assess | |||||