P0C6U0 (R1A_CVBM) Bovine coronavirus (strain Mebus) (BCoV) (BCV)

Replicase polyprotein 1a UniProtKBInterProInteractive Modelling

4383 aa; Sequence (Fasta)

Molecule Processing
Non-structural protein 1
Non-structural protein 2
Non-structural protein 3
Non-structural protein 4
3C-like proteinase
Non-structural protein 6
Non-structural protein 7
Non-structural protein 8
Non-structural protein 9
Non-structural protein 10
Non-structural protein 11

Sequence Features

Add
 1074For PL1-PRO activity
 1225For PL1-PRO activity
 1671For PL2-PRO activity
 1828For PL2-PRO activity
 3287For 3CL-PRO activity
 3391For 3CL-PRO activity
 4306Zinc 1
 4309Zinc 1
 4315Zinc 1
 4322Zinc 1
 4348Zinc 2
 4351Zinc 2
 4359Zinc 2
 4361Zinc 2
 2138-2158Helical
 2199-2219Helical
 2221-2241Helical
 2313-2333Helical
 2343-2363Helical
 2365-2385Helical
 2752-2772Helical
 3031-3051Helical
 3063-3083Helical
 3090-3110Helical
 3115-3135Helical
 3558-3578Helical
 3588-3608Helical
 3615-3635Helical
 3657-3677Helical
 3684-3704Helical
 3711-3731Helical
 3755-3775Helical
 1151-1179C4-type 1
 1749-1785C4-type 2
 4306-4322
 4348-4361
 246-247Cleavage; by PL1-PRO
 851-852Cleavage; by PL1-PRO
 2750-2751Cleavage; by PL2-PRO
 3246-3247Cleavage; by 3CL-PRO
 3549-3550Cleavage; by 3CL-PRO
 3836-3837Cleavage; by 3CL-PRO
 3925-3926Cleavage; by 3CL-PRO
 4122-4123Cleavage; by 3CL-PRO
 4232-4233Cleavage; by 3CL-PRO
 4369-4370Cleavage; by 3CL-PRO
 1-354Betacoronavirus NSP1
IPR022570PF11963
 678-850Non-structural protein 2, C-terminal domain, coronavirus
IPR043613PF19212
 1055-1285Peptidase C30/C16, Betacoronavirus
IPR002705PF01831
 1297-1401Macro domain
IPR002589PF01661
 1565-1865Peptidase C16, coronavirus
IPR013016PF08715
 1900-2016Non-structural protein NSP3, nucleic acid-binding (NAR) domain, betacoronavirus
IPR032592PF16251
 2250-2735Coronavirus replicase NSP3, C-terminal
IPR043611PF19218
 2772-3128Coronavirus replicase NSP4, N-terminal
IPR043612PF19217
 3153-3244Non-structural protein NSP4, C-terminal, coronavirus
IPR032505PF16348
 3275-3562Peptidase C30, coronavirus
IPR008740PF05409
 3577-3836Non-structural protein 6, coronavirus
IPR043610PF19213
 3837-3925Non-structural protein NSP7, coronavirus
IPR014828PF08716
 3926-4116Non-structural protein NSP8, coronavirus-like
IPR014829PF08717
 4123-4232Non-structural protein NSP9, coronavirus
IPR014822PF08710
 4241-4361RNA synthesis protein NSP10, coronavirus
IPR018995PF09401

Sequence Alignments

Non-structural protein 3 852-2750; PRO_0000338161

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer ZN;-0.644ypt.1.A1487-1865
65.12
Assess

3C-like proteinase 3247-3549; PRO_0000338163

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer 02J;-1.556jij.1.A3247-3545
83.72
Assess