P0C6W6 (R1AB_BCRP3) Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like coronavirus Rp3)

Replicase polyprotein 1ab UniProtKBInterProInteractive Modelling

7071 aa; Sequence (Fasta)

Molecule Processing
Host translation inhibitor nsp1
Non-structural protein 2
Papain-like proteinase
Non-structural protein 4
3C-like proteinase
Non-structural protein 6
Non-structural protein 7
Non-structural protein 8
Non-structural protein 9
Non-structural protein 10
RNA-directed RNA polymerase
Helicase
Guanine-N7 methyltransferase
Uridylate-specific endoribonuclease
2'-O-methyltransferase

Sequence Features

Add
 1649For PL-PRO activity
 1810For PL-PRO activity
 3279For 3CL-PRO activity
 3383For 3CL-PRO activity
 5304Zinc 1
 5307Zinc 1
 5315Zinc 2
 5318Zinc 1
 5325Zinc 1
 5328Zinc 2
 5332Zinc 2
 5338Zinc 2
 5349Zinc 3
 5354Zinc 3
 5371Zinc 3
 5374Zinc 3
 2201-2221Helical
 2312-2334Helical
 2349-2369Helical
 2753-2773Helical
 3020-3040Helical
 3059-3079Helical
 3081-3101Helical
 3103-3123Helical
 3140-3160Helical
 3562-3582Helical
 3584-3604Helical
 3610-3630Helical
 3657-3676Helical
 3683-3702Helical
 3726-3746Helical
 3754-3774Helical
 1727-1764C4-type
 4302-4318
 4345-4358
 5581-5588ATP
 179-180Cleavage
 818-819Cleavage; by PL-PRO
 3238-3239Cleavage; by PL-PRO
 3544-3545Cleavage; by 3CL-PRO
 3834-3835Cleavage; by 3CL-PRO
 3917-3918Cleavage; by 3CL-PRO
 4115-4116Cleavage; by 3CL-PRO
 4228-4229Cleavage; by 3CL-PRO
 4367-4368Cleavage; by 3CL-PRO
 5299-5300Cleavage; by 3CL-PRO
 5900-5901Cleavage; by 3CL-PRO
 6427-6428Cleavage; by 3CL-PRO
 6773-6774Cleavage; by 3CL-PRO
 9-144Non-structural protein NSP1, betacoronavirus
IPR021590PF11501
 183-423Nonstructural protein 2, N-terminal domain, coronavirus
IPR043615PF19211
 652-818Non-structural protein 2, C-terminal domain, coronavirus
IPR043613PF19212
 881-1026Non-structural protein NSP3, N-terminal, betacoronavirus
IPR024358PF12379
 1034-1139Macro domain
IPR002589PF01661
 1325-1467Non-structural protein NSP3, SUD-M domain, betacoronavirus
IPR024375PF11633
 1471-1536DPUP/SUD, C-terminal, betacoronavirus
IPR022733PF12124
 1539-1857Peptidase C16, coronavirus
IPR013016PF08715
 1892-1994Non-structural protein NSP3, nucleic acid-binding (NAR) domain, betacoronavirus
IPR032592PF16251
 2236-2723Coronavirus replicase NSP3, C-terminal
IPR043611PF19218
 2763-3116Coronavirus replicase NSP4, N-terminal
IPR043612PF19217
 3141-3236Non-structural protein NSP4, C-terminal, coronavirus
IPR032505PF16348
 3267-3557Peptidase C30, coronavirus
IPR008740PF05409
 3573-3834Non-structural protein 6, coronavirus
IPR043610PF19213
 3835-3917Non-structural protein NSP7, coronavirus
IPR014828PF08716
 3918-4114Non-structural protein NSP8, coronavirus-like
IPR014829PF08717
 4116-4228Non-structural protein NSP9, coronavirus
IPR014822PF08710
 4237-4359RNA synthesis protein NSP10, coronavirus
IPR018995PF09401
 4382-4733RNA polymerase, N-terminal, coronaviral
IPR009469PF06478
 4767-5255RNA-directed RNA polymerase, C-terminal domain
IPR001205PF00680
 5647-5871(+) RNA virus helicase core domain
IPR027351PF01443
 5904-6425Non-structural protein 14, coronavirus
IPR009466PF06471
 6428-6488Coronavirus replicase NSP15, N-terminal oligomerisation
IPR043606PF19219
 6498-6594Coronavirus replicase NSP15, middle domain
IPR043608PF19216
 6619-6771NendoU domain, nidovirus
IPR043609PF19215
 6775-7070Non-structural protein NSP16, coronavirus-like
IPR009461PF06460

Sequence Alignments

Papain-like proteinase 819-2738; PRO_0000043081

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer ZN;-1.455tl6.2.A1542-1853
98.73
Assess

3C-like proteinase 3239-3544; PRO_0000043082

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer AZP;-0.712gtb.1.A3240-3538
99.35
Assess

RNA-directed RNA polymerase 4368-5299; PRO_0000043088

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer ZN;-1.607c2k.1.A4368-5296
96.24
Assess

Helicase 5300-5900; PRO_0000043089

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer ZN;-4.596jyt.1.A5300-5895
99.50
Assess

Guanine-N7 methyltransferase 5901-6427; PRO_0000043090

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer ZN;-2.755nfy.3.A5901-6425
99.05
Assess

Uridylate-specific endoribonuclease 6428-6773; PRO_0000043091

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer -0.422rhb.1.A6428-6771
97.11
Assess