P0C6X9 (R1AB_CVMA5) Murine coronavirus (strain A59) (MHV-A59) (Murine hepatitis virus)

Replicase polyprotein 1ab UniProtKBInterProInteractive Modelling

7176 aa; Sequence (Fasta)

Molecule Processing
Host translation inhibitor nsp1
Non-structural protein 2
Papain-like proteinase
Non-structural protein 4
3C-like proteinase
Non-structural protein 6
Non-structural protein 7
Non-structural protein 8
Non-structural protein 9
Non-structural protein 10
RNA-directed RNA polymerase
Helicase
Guanine-N7 methyltransferase
Uridylate-specific endoribonuclease
2'-O-methyltransferase

Sequence Features

Add
 1121For PL1-PRO activity
 1272For PL1-PRO activity
 1716For PL2-PRO activity
 1873For PL2-PRO activity
 3374For 3CL-PRO activity
 3478For 3CL-PRO activity
 5387Zinc 1
 5390Zinc 1
 5398Zinc 2
 5401Zinc 1
 5408Zinc 1
 5411Zinc 2
 5415Zinc 2
 5421Zinc 2
 5432Zinc 3
 5437Zinc 3
 5454Zinc 3
 5457Zinc 3
 1699P -> S (in strain: Isolate C12 mutant)
 2196M -> K (in strain: Isolate C12 mutant)
 5773R -> S (in strain: Isolate C12 mutant)
 2225-2245Helical
 2286-2306Helical
 2314-2334Helical
 2400-2420Helical
 2442-2462Helical
 2625-2645Helical
 2847-2867Helical
 3096-3116Helical
 3118-3138Helical
 3150-3170Helical
 3177-3197Helical
 3202-3222Helical
 3644-3664Helical
 3674-3694Helical
 3699-3719Helical
 3742-3762Helical
 3769-3789Helical
 3796-3816Helical
 3840-3860Helical
 1198-1226C4-type 1
 1794-1830C4-type 2
 4391-4407
 4433-4446
 5663-5670ATP
 247-248Cleavage; by PL1-PRO
 832-833Cleavage; by PL1-PRO
 2837-2838Cleavage; by PL2-PRO
 3333-3334Cleavage; by 3CL-PRO
 3635-3636Cleavage; by 3CL-PRO
 3921-3922Cleavage; by 3CL-PRO
 4013-4014Cleavage; by 3CL-PRO
 4207-4208Cleavage; by 3CL-PRO
 4317-4318Cleavage; by 3CL-PRO
 4454-4455Cleavage; by 3CL-PRO
 5382-5383Cleavage; by 3CL-PRO
 5982-5983Cleavage; by 3CL-PRO
 6503-6504Cleavage; by 3CL-PRO
 6877-6878Cleavage; by 3CL-PRO
 1-355Betacoronavirus NSP1
IPR022570PF11963
 671-832Non-structural protein 2, C-terminal domain, coronavirus
IPR043613PF19212
 952-1074Betacoronavirus NSP1
IPR022570PF11963
 1084-1332Peptidase C30/C16, Betacoronavirus
IPR002705PF01831
 1344-1449Macro domain
IPR002589PF01661
 1611-1913Peptidase C16, coronavirus
IPR013016PF08715
 1945-2061Non-structural protein NSP3, nucleic acid-binding (NAR) domain, betacoronavirus
IPR032592PF16251
 2337-2822Coronavirus replicase NSP3, C-terminal
IPR043611PF19218
 2859-3215Coronavirus replicase NSP4, N-terminal
IPR043612PF19217
 3237-3331Non-structural protein NSP4, C-terminal, coronavirus
IPR032505PF16348
 3362-3648Peptidase C30, coronavirus
IPR008740PF05409
 3663-3921Non-structural protein 6, coronavirus
IPR043610PF19213
 3922-4010Non-structural protein NSP7, coronavirus
IPR014828PF08716
 4011-4204Non-structural protein NSP8, coronavirus-like
IPR014829PF08717
 4208-4317Non-structural protein NSP9, coronavirus
IPR014822PF08710
 4326-4446RNA synthesis protein NSP10, coronavirus
IPR018995PF09401
 4468-4816RNA polymerase, N-terminal, coronaviral
IPR009469PF06478
 4849-5339RNA-directed RNA polymerase, C-terminal domain
IPR001205PF00680
 5814-5956DNA2/NAM7 helicase-like, C-terminal
IPR041679PF13087
 5984-6501Non-structural protein 14, coronavirus
IPR009466PF06471
 6504-6564Coronavirus replicase NSP15, N-terminal oligomerisation
IPR043606PF19219
 6574-6665Coronavirus replicase NSP15, middle domain
IPR043608PF19216
 6723-6875NendoU domain, nidovirus
IPR043609PF19215
 6879-7175Non-structural protein NSP16, coronavirus-like
IPR009461PF06460

Sequence Alignments

Papain-like proteinase 833-2837; PRO_0000037340

DescriptionOligo-stateLigandsStructureRange
X-ray structure of MHV PLP2 (Cys1716Ser) catalytic mutant in complex with free ubiquitin Heteromer
P0CG47;
GOL;FMT;ZN;5wfi 1609-1909
Assess
X-ray structural of three tandemly linked domains of nsp3 from murine hepatitis virus at 2.60 Angst…monomer ZN;GOL;4ypt 1533-1910
Assess

Non-structural protein 4 2838-3333; PRO_0000037341

DescriptionOligo-stateLigandsStructureRange
C425S mutant of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepatitis …homo-2-mer 3vcb 3245-3332
Assess
Crystal structure of the C-terminal cytoplasmic domain of non-structural protein 4 from mouse hepat…homo-2-mer 3vc8 3245-3329
Assess

3C-like proteinase 3334-3635; PRO_0000037342

DescriptionOligo-stateLigandsStructureRange
The Crystal Structure of Main Protease from Mouse Hepatitis Virus A59 in Complex with an inhibitorhomo-2-mer 6jij 3334-3631
Assess
Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer 02J;-0.966jij.1.A3334-3631
99.67
Assess

RNA-directed RNA polymerase 4455-5382; PRO_0000037348

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer ZN;-1.647c2k.1.A4455-5379
66.77
Assess

Guanine-N7 methyltransferase 5983-6503; PRO_0000037350

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer ZN;-4.085c8s.2.B5985-6501
58.69
Assess

Uridylate-specific endoribonuclease 6504-6877; PRO_0000037351

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer -1.832gth.1.A6504-6872
100.00
Assess