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P18177 (TCDB_CLODI) Clostridioides difficile (Peptoclostridium difficile)

Toxin B UniProtKBInterProInteractive Modelling

2366 aa; Sequence (Fasta) ; 2 identical sequences: Clostridioides difficile: Q189K3, A0A7M4CIP3

Available Structures

28 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
state 1 of TcdB and FZD2 at pH5 Heteromer
Q14332;
2-2366
Assess
State 2 of TcdB and FZD2 at pH5 Heteromer
Q14332;
2-2366
Assess
Full-length TcdB and CSPG4 (401-560) complex Heteromer
Q6UVK1;
2-2366
Assess
TcdB and frizzled-2 CRD complex Heteromer
Q14332;
2-2366
Assess
cryo-EM structure complex of Frizzled-7 and Clostridioides difficile toxin B Heteromer
O75084;
2-2194
ZN;
Assess
Clostridioides difficile toxinB with DLD-4 darpin Heteromer
4-2099
Assess
Structural basis for CSPG4 as a receptor for TcdB and a therapeutic target in Clostridioides diffic… Heteromer
Q6UVK1;
1-1896
ZN;
Assess
Partial C. difficile TcdB and CSPG4 fragment Heteromer
Q6UVK1;
374-1876
Assess
Structure of the GTD domain of Clostridium difficile toxin B in complex with VHH 7F Heteromer
1-542
Assess
Novel structural insights for a pair of monoclonal antibodies recognizing non-overlapping epitopes … Heteromer
3-543
Assess
Structures of TcdB in complex with Cdc42 Heteromer
P60953;
1-540
MN;UDP; 11×SO4;GDP;MG;
Assess
Novel structural insights for a pair of monoclonal antibodies recognizing non-overlapping epitopes … Heteromer
1-535
Assess
Structural basis for recognition of frizzled proteins by Clostridium difficile toxin B Heteromer
Q14332;
1285-1804
MLI;NAG;PAM;
Assess
Structure of the pore forming fragment of Clostridium difficile toxin B in complex with VHH 5D Heteromer
1089-1430
Assess
Clostridium difficile toxin B CROP domain in complex with FAB domains of neutralizing antibody bezl… Heteromer
1834-2099
Assess
Crystal structure of TcdB-B1 bound to B39 VHH Heteromer
2248-2365
Assess
Structure of the C. difficile TcdB cysteine protease domain in complex with a peptide inhibitorhomo-2-mer550-794
621;CA;NA;IHP;
Assess
State 3 of TcdB and FZD2 at pH5monomer2-2366
Assess
state 4 of TcdB and FZD2 at pH5monomer2-2366
Assess
cryo-EM structure of apo Clostridioides difficile toxin Bmonomer2-2364
ZN;
Assess
Crystal structure of the catalytic domain of toxin B from Clostridium difficile in complex with UDP…monomer1-543
MN;UDP;GLC;SO4;TBR;
Assess
Crystal structure of Clostridium difficile Toxin B (TcdB) glucosyltransferase in complex with UDP a…monomer2-543
EDO;UDP;IFM;MN;
Assess
Clostridium difficile Toxin B (TcdB) glucosyltransferase domain in complex with U2Fmonomer2-543
MN;U2F;SO4;
Assess
Crystal structure of the catalytic domain of toxin B from Clostridium difficile in complex with UDP…monomer1-542
MN;UDP;GLC;SO4;
Assess
Clostridium difficile Toxin B (TcdB) glucosyltransferase domain in complex with U2Fmonomer2-542
MN;U2F;SO4;
Assess
Crystal structure of Clostridium difficile Toxin B (TcdB) glucosyltransferase in complex with UDP a…monomer2-540
NOY;UDP;GOL;MN;
Assess
Clostridium difficile Toxin B (TcdB) glucosyltransferase domain co-crystallized with apigeninmonomer2-539
MN;
Assess
Structure of the C. difficile TcdB cysteine protease domainmonomer551-794
IHP;
Assess

2 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
6oq5.1.Amonomer0.692-2366
ZN;MG;93.49
Assess
8x2h.1.Amonomer0.681-2365
ZN;75.97
Assess