P33297 | SWISS-MODEL Repository

P33297 (PRS6A_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

26S proteasome regulatory subunit 6A UniProtKB InterPro STRING Interactive Modelling

434 aa; Sequence (Fasta) ; 10 identical sequences: Saccharomyces cerevisiae: N1NWL4, G2WMZ3, C8ZI79, C7GML9, A6ZNW5, B3LJG0; Saccharomyces pastorianus: A0A6C1DZF0; Saccharomyces boulardii: A0A0L8VI52; Saccharomyces arboricola: J8PHZ0; Saccharomyces cerevisiae x Saccharomyces kudriavzevii: H0GNN5

It is possible new templates exist for this target since these models were created.

Available Structures

31 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Structure of yeast 26S proteasome in M1 state derived from Titan dataset	3jco PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	1-424	100.0
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Structure of yeast 26S proteasome in M2 state derived from Titan dataset	3jcp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	1-424	100.0
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26S proteasome WT-Ubp6-UbVS complex in the si state (ATPases, Rpn1, Ubp6, and UbVS)	7qo4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0CG47; P33298; P33299; P38764; P40327; P43593; P53549; Q01939;	14-434	100	5×ATP; 6×MG; 1×ADP;
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26S proteasome, s2 state	6fvu PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	14-434	100	5×ATP; 6×MG; 1×ADP;
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26S proteasome, s4 state	6fvw PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	14-434	100	4×ATP; 6×MG; 2×ADP;
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26S proteasome, s6 state	6fvy PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	14-434	100	4×ATP; 6×MG; 2×ADP;
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26S proteasome, s1 state	6fvt PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	14-434	100	5×ATP; 6×MG; 1×ADP;
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26S proteasome, s3 state	6fvv PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	14-434	100	2×ADP; 6×MG; 4×ATP;
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26S proteasome, s5 state	6fvx PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	14-434	100	5×ATP; 6×MG; 1×ADP;
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26S proteasome Rpt1-RK -Ubp6-UbVS complex in the si state	7qo5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P0CG47; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P43593; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	14-434	100	5×ATP; 6×MG; 1×ADP;
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26S proteasome in presence of BeFx (s4)	5mpc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P43593; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	27-434	100.0	4×ATP; 6×MG; 2×ADP;
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26S proteasome in presence of ATP (s1)	5mp9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P33298; P33299; P38624; P40302; P40303; P40327; P53549; Q01939;	27-434	100.0	5×ATP; 6×MG; 1×ADP;
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26S proteasome in presence of ATP (s2)	5mpa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P33298; P33299; P38624; P40302; P40303; P40327; P53549; Q01939;	27-434	100.0	6×MG; 5×ATP; 1×ADP;
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26S proteasome in presence of AMP-PNP (s3)	5mpb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	27-434	100.0	5×ANP; 6×MG; 1×ADP;
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Yeast 26S proteasome bound to ubiquitinated substrate (4D motor state)	6ef3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P07818; P0CH08; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P33298; P33299; P38624; P40302; P40303; P40327; P43588; P53549; Q01939;	37-434	100.0	4×ATP; 2×ADP;
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The resting state of yeast proteasome	5wvi PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	41-434	100.0
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Yeast proteasome-ADP-AlFx	5wvk PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	41-434	100.0
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yeast proteasome in Ub-engaged state (C2)	6j30 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	41-434	100.0
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Yeast proteasome in resting state (C1-a)	6j2x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	41-434	100.0
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yeast proteasome in substrate-processing state (C3-b)	6j2n PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	41-434	100.0
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Yeast proteasome in Ub-accepted state (C1-b)	6j2q PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	41-434	100.0
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Yeast proteasome in translocation competent state (C3-a)	6j2c PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	41-434	100.0
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Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S prot…	4cr2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	41-434	100.0
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Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S prot…	4cr4 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	41-434	100.0
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Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S prot…	4cr3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P53549; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	41-434	100.0
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Structure of the 26S proteasome-Ubp6 complex	5a5b PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O13563; O94742; P21242; P21243; P22141; P23638; P23639; P23724; P25043; P25451; P30656; P30657; P32379; P32496; P32565; P33298; P33299; P38624; P38764; P38886; P40016; P40302; P40303; P40327; P43588; P43593; P53549; P62987; Q01939; Q04062; Q06103; Q08723; Q12250; Q12377;	41-434	100.0
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Yeast 26S proteasome bound to ubiquitinated substrate (5T motor state)	6ef2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P07818; P21242; P21243; P23638; P23639; P32379; P33298; P33299; P40302; P40303; P40327; P53549; Q01939;	165-434	100	4×ATP; 2×ADP;
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Yeast 26S proteasome bound to ubiquitinated substrate (5D motor state)	6ef1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P07818; P21242; P21243; P23638; P23639; P32379; P33298; P33299; P40302; P40303; P40327; P53549; Q01939;	173-434	100	4×ATP; 2×ADP;
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Yeast 26S proteasome bound to ubiquitinated substrate (1D* motor state)	6ef0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P07818; P21242; P21243; P23638; P23639; P32379; P33298; P33299; P40302; P40303; P40327; P53549; Q01939;	176-433	100	3×ADP; 3×ATP;
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Crystal structure of Nas2 N-terminal domain complexed with PAN-Rpt5C chimera	3whl PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P40555; Q8U4H3;	356-425	100	1×ATP;
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Crystal structure of PAN-Rpt5C chimera	3whk PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	356-429	100	1×ATP;
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2 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
7qo6.1.j	monomer	0.66	14-434	100.00
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3jcp.1.V	monomer	0.55	1-424	100.00
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

P33297 (PRS6A_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

26S proteasome regulatory subunit 6A UniProtKBInterProSTRINGInteractive Modelling

Available Structures

31 Experimental Structures

2 SWISS-MODEL models

Alignments

Background

Resolution

26S proteasome regulatory subunit 6A UniProtKB InterPro STRING Interactive Modelling