P33643 (RLUD_ECOLI) Escherichia coli (strain K12)
Ribosomal large subunit pseudouridine synthase D UniProtKBInterProSTRINGInteractive Modelling
326 aa; Sequence (Fasta) ;
8 identical sequences: Escherichia coli MS 124-1: E1JBP1; Escherichia coli MS 85-1: E6BRK7; Escherichia coli H386: A0A1X3JCL4; Escherichia coli: J7QGH7, A0A140N6U7; Escherichia coli 53638: A0A0E1SXH7; Escherichia coli O9:H4: A0A7I6H7N3; Escherichia coli 909945-2: V0AJW2
Available Structures
5 Experimental Structures
Description | PDB ID | Oligo-state | Range | Ligands | ||
---|---|---|---|---|---|---|
pre-50S-ObgE particle |
Heteromer P02413; P0A7J3; P0A7J7; P0A7K6; P0A7L3; P0A7L8; P0A7M2; P0A7M6; P0A7M9; P0A7N4; P0A7N9; P0A7P5; P0A7R1; P0A8X0; P0AA10; P0AAT6; P0ADY3; P0ADY7; P0ADZ0; P0AG44; P0AG48; P0AG51; P0AG55; P0C018; P42641; P60422; P60438; P60624; P60723; P61175; P62399; P68919; | 1×GDP; 2×MG; 1×ZN; | ||||
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crystal structure of RluD from E. coli | monomer | 1×CL; 2×BCT; | ||||
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Crystal structure of pseudouridine synthase RluD catalytic module | monomer | |||||
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Crystal structure of catalytic domain of pseudouridine synthase RluD from Escherichia coli | monomer | 1×PO4; | ||||
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Structure of the catalytic domain of 23S rRNA pseudouridine synthase RluD | monomer | |||||
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3 SWISS-MODEL models
Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
---|---|---|---|---|---|---|
2ist.1.A | monomer | 0.88 | 100.00 | |||
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7bl5.1.0 | monomer | 0.79 | 100.00 | |||
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6v39.1.7 | monomer | 0.55 | 16.13 | |||
Assess |