P33643 (RLUD_ECOLI) Escherichia coli (strain K12)
Ribosomal large subunit pseudouridine synthase D UniProtKBInterProSTRINGInteractive Modelling
326 aa; Sequence (Fasta) ;
8 identical sequences: Escherichia coli MS 85-1: A0AAN3M5K7; Escherichia coli H386: A0A1X3JCL4; Shigella sonnei: A0AAE5N3P0; Shigella dysenteriae: A0AAN3ZJA2; Escherichia coli: J7QGH7, A0A140N6U7; Escherichia coli O9:H4: A0A7I6H7N3; Escherichia coli MP021552.12: A0AB33Y6L9
It is possible new templates exist for this target since these models were created.
Available Structures
5 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| pre-50S-ObgE particle |
Heteromer P02413; P0A7J3; P0A7J7; P0A7K6; P0A7L3; P0A7L8; P0A7M2; P0A7M6; P0A7M9; P0A7N4; P0A7N9; P0A7P5; P0A7R1; P0A8X0; P0AA10; P0AAT6; P0ADY3; P0ADY7; P0ADZ0; P0AG44; P0AG48; P0AG51; P0AG55; P0C018; P42641; P60422; P60438; P60624; P60723; P61175; P62399; P68919; | 100.0 | 1×GDP; 2×MG; 1×ZN; | |||
| crystal structure of RluD from E. coli | monomer | 100.0 | 1×CL; 2×BCT; | |||
| Crystal structure of pseudouridine synthase RluD catalytic module | monomer | 99.6 | ||||
| Crystal structure of catalytic domain of pseudouridine synthase RluD from Escherichia coli | monomer | 100 | 1×PO4; | |||
| Structure of the catalytic domain of 23S rRNA pseudouridine synthase RluD | monomer | 100 | ||||
3 SWISS-MODEL models
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 2ist.1.A | monomer | 0.88 | 100.00 | |||
| 7bl5.1.0 | monomer | 0.79 | 100.00 | |||
| 6v3b.1.7 | monomer | 0.54 | 16.13 | |||