P35498 | SWISS-MODEL Repository

P35498 (SCN1A_HUMAN) Homo sapiens (Human)

Sodium channel protein type 1 subunit alpha UniProtKB InterPro STRING Interactive Modelling

2009 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3)

It is possible new templates exist for this target since these models were created.

Available Structures

1 Experimental Structure

Description	PDB ID	Oligo-state	Range	Ligands
Voltage-gated sodium channel Nav1.1 and beta4	7dtd SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer Q8IWT1;	116-1795	4×NAG; 1×9Z9;
Assess

2 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
6a90.1.A	monomer	0.64	1202-1901		44.15
Assess
7w9k.1.A	monomer	0.63	10-1917	1×P5S; 2×Y01; 1×9Z9; 7×LPE; 1×1PW; 2×PCW;	77.29
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

3 SWISS-MODEL models built on isoform sequence

Template	Isoform	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	7w9t.1.A	monomer	0.62	10-1906	3×Y01; 8×LPE; 3×PCW;	77.22
Assess
Isoform 3	6a90.1.A	monomer	0.64	1174-1873		44.15
Assess
Isoform 3	7w9k.1.A	monomer	0.63	10-1889	2×P5S; 2×Y01; 1×9Z9; 7×LPE; 1×1PW; 2×PCW;	77.38
Assess

Alignments