P35498 | SWISS-MODEL Repository

P35498 (SCN1A_HUMAN) Homo sapiens (Human)

Sodium channel protein type 1 subunit alpha UniProtKB InterPro STRING Interactive Modelling

2009 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3)

Available Structures

1 Experimental Structure

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	Voltage-gated sodium channel Nav1.1 and beta4	7dtd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q8IWT1;	116-1795	100.0	4×NAG; 1×9Z9;
	Download Compare Structure Assessment

2 SWISS-MODEL models

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	7w9k.1.A	monomer	0.62	10-1917	1×P5S; 2×Y01; 1×9Z9; 7×LPE; 1×1PW; 2×PCW;	77.29
	Download ModelCIF format PDB format Model report Compare Structure Assessment
	8vyj.1.A	monomer	0.52	13-1896	1×6OU; 2×Y01;	64.69
	Download ModelCIF format PDB format Model report Compare Structure Assessment

	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

4 SWISS-MODEL models built on isoform sequence

	Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	Isoform 2	7w9m.1.A	monomer	0.61	10-1906	3×Y01;	77.22
	Download ModelCIF format PDB format Model report Compare Structure Assessment
	Isoform 2	8vyj.1.A	monomer	0.52	13-1885	1×6OU; 2×Y01;	64.89
	Download ModelCIF format PDB format Model report Compare Structure Assessment
	Isoform 3	7w9k.1.A	monomer	0.63	10-1889	2×P5S; 2×Y01; 1×9Z9; 7×LPE; 1×1PW; 2×PCW;	77.38
	Download ModelCIF format PDB format Model report Compare Structure Assessment
	Isoform 3	8vyj.1.A	monomer	0.52	13-1868	1×6OU; 2×Y01;	65.15
	Download ModelCIF format PDB format Model report Compare Structure Assessment

Alignments