P43694 (GATA4_HUMAN) Homo sapiens (Human)

Transcription factor GATA-4 UniProtKBInterProSTRINGInteractive Modelling

442 aa; Sequence (Fasta) ; (Isoform 2; ) Identical sequences: Pan troglodytes: H2QVR5; A0A6D2VWI2

Sequence Features

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 6A -> V (in VSD1; dbSNP:rs199922907) VAR_067605 dbSNP
 9A -> P (in TOF; slightly diminished DNA-binding affinity; decreased transcriptional activity; no effect on subcellular location; no effect on interaction with TBX5; dbSNP:rs864321699) VAR_071514 dbSNP
 39V -> L (probable disease-associated variant found in patients with dilated cardiomyopathy; results in significantly reduced transactivation activity; dbSNP:rs1139241) VAR_072111 dbSNP
 43R -> W (in VSD1; significantly reduced activation of the NPPA promoter with the mutant protein compared to wild- type; dbSNP:rs387906770) VAR_067606 dbSNP
 46Missing (in VSD1) VAR_067607
 51L -> V (in TOF; slightly diminished DNA-binding affinity; decreased transcriptional activity; no effect on subcellular location; no effect on interaction with TBX5) VAR_071515
 52S -> F (in ASD2; dbSNP:rs104894074) VAR_038195 dbSNP
 93G -> A (in ASD2; unknown pathological significance; dbSNP:rs56191129) VAR_067608 dbSNP
 118A -> AA (in TOF) VAR_067609
 163P -> S (in AVSD4; also in a patient with VSD1 and a patient with TOF; dbSNP:rs387906769) VAR_067610 dbSNP
 221G -> R (in TACHD; impairs the ability to bind and transactivate the promoter of AMH gene; abolishes interaction with ZFPM2; dbSNP:rs398122402) VAR_070670 dbSNP
 226P -> Q (probable disease-associated variant found in patients with dilated cardiomyopathy; results in significantly reduced transactivation activity) VAR_072112
 271C -> S (probable disease-associated variant found in patients with dilated cardiomyopathy; results in significantly reduced transactivation activity) VAR_072113
 279T -> S (probable disease-associated variant found in patients with dilated cardiomyopathy; results in significantly reduced transactivation activity) VAR_072114
 280T -> M (in ASD2; dbSNP:rs387906771) VAR_067611 dbSNP
 285N -> S (in TOF; drastically diminished DNA-binding affinity; decreased transcriptional activity; no effect on subcellular location; completely disrupted interaction with TBX5) VAR_071516
 296G -> C (in ASD2; dbSNP:rs104894073) VAR_067612 dbSNP
 296G -> R (in VSD1; dbSNP:rs104894073) VAR_067613 dbSNP
 296G -> S (in ASD2; decreased function resulting in reduced myocardial genes expression; fails to downregulate endothelial and endocardial genes; dbSNP:rs104894073) VAR_016204 dbSNP
 310M -> V (in ASD2; dbSNP:rs387906772) VAR_067614 dbSNP
 316Q -> E (in ASD2; unknown pathological significance; dbSNP:rs56298569) VAR_067615 dbSNP
 346A -> V (in AVSD4; dbSNP:rs115372595) VAR_067616 dbSNP
 359E -> K (in VSD1; dbSNP:rs368489876) VAR_067617 dbSNP
 377S -> G (in dbSNP:rs3729856) VAR_038196 dbSNP
 403L -> M (in ASD2; dbSNP:rs777778466) VAR_067618 dbSNP
 407P -> Q (in VSD1 and TOF; unknown pathological significance; dbSNP:rs115099192) VAR_067619 dbSNP
 411A -> V (in dbSNP:rs55633527) VAR_067620 dbSNP
 425D -> N (in dbSNP:rs56208331) VAR_067621 dbSNP
 429S -> T (in VSD1) VAR_067622
 442A -> V (in VSD1; dbSNP:rs146017816) VAR_067623 dbSNP
 217-241GATA-type 1
 271-295GATA-type 2
 1-204GATA-type transcription activator, N-terminal
IPR008013PF05349
 217-249Zinc finger, GATA-type
IPR000679PF00320
 271-304Zinc finger, GATA-type
IPR000679PF00320

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
Solution NMR Structure of Transcription Factor GATA-4 from Homo sapiens, Northeast Structural Genom…monomer ZN;2m9w262-321
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -2.80 4hc7.2.A214-319
86.11ZN;
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monomer -1.21 3vd6.1.C214-323
74.56ZN;
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monomer -0.76 4hc9.1.A215-319
86.11ZN;
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monomer -2.26 4hc7.1.A214-319
86.11ZN;
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Homology models built on isoform sequence

IsoformOligo-stateLigandsQMEANTemplateRangeSeq id (%)
Isoform 2monomerZN;-2.874hc7.2.A215-320
86.11
Assess
Isoform 2monomerZN;-1.273vd6.1.C215-324
74.36
Assess
Isoform 2monomerZN;-0.824hc9.1.A216-320
86.11
Assess
Isoform 2monomerZN;-2.354hc7.1.A215-320
86.11
Assess
Isoform 2monomerZN;-3.532m9w.1.A263-322
100.00
Assess