P47822 | SWISS-MODEL Repository

P47822 (MED21_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Mediator of RNA polymerase II transcription subunit 21 UniProtKB InterPro STRING Interactive Modelling

140 aa; Sequence (Fasta) ; 6 identical sequences: Saccharomyces cerevisiae: N1PAH5, G2WB46, C8Z5L9, A6ZYQ6, B3LFY8; Saccharomyces boulardii: A0A0L8VTJ3

It is possible new templates exist for this target since these models were created.

Available Structures

9 Experimental Structures

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	Mediator-PIC Early (Core B)	7uif PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P07273; P08518; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P33308; P34087; P34162; P38304; P38633; P38782; P38902; P40422; P41895; P41896; Q06213; Q08278; Q12321; Q12343; Q99278;	1-140	100.0
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	Mediator-PIC Early (Mediator A)	7uig PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P19263; P25046; P32569; P32570; P32585; P33308; P34162; P38304; P38633; P38782; Q06213; Q08278; Q12321; Q12343; Q99278;	1-140	100.0
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	Core Mediator-PICearly (Copy A)	7ui9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P07273; P08518; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P33308; P34087; P34162; P38304; P38633; P38782; P38902; P40422; P41895; P41896; Q06213; Q08278; Q12321; Q12343; Q99278;	1-140	100.0
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	Yeast RNA polymerase II transcription pre-initiation complex with core Mediator and the +1 nucleoso…	8ceo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02281; P04050; P06839; P06897; P08518; P13393; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P32776; P33308; P34087; P34162; P36100; P36145; P38304; P38633; P38782; P38902; P40422; P41895; P41896; P62799; P84233; Q00578; Q02939; Q03290; Q04673; Q06213; Q08278; Q12004; Q12321; Q12343; Q3E7C1; Q99278;	3-138	100	1×SF4; 17×ZN; 1×MG;
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	STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH AND CORE MEDIATOR	5oqm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P32776; P33308; P34087; P34162; P36100; P36145; P38304; P38633; P38782; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q06213; Q08278; Q12004; Q12343; Q3E7C1; Q99278;	3-138	100	16×ZN; 1×MG; 1×SF4;
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	Yeast RNA polymerase II transcription pre-initiation complex with core Mediator	8cen PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P19263; P20433; P20434; P20435; P20436; P22139; P25046; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P32776; P33308; P34087; P34162; P36100; P36145; P38304; P38633; P38782; P38902; P40422; P41895; P41896; Q00578; Q02939; Q03290; Q04673; Q06213; Q08278; Q12004; Q12321; Q12343; Q3E7C1; Q99278;	3-138	100	1×SF4; 17×ZN; 1×MG;
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	Structure of the mediator MED7/MED21 subcomplex	1yke PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q08278;	3-133	100.0
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	Mediator-RNA Polymerase II Pre-Initiation Complex	5sva PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P04050; P06839; P08518; P13393; P16370; P20433; P20434; P20435; P20436; P22139; P27999; P29055; P32569; P32570; P32585; P32773; P32774; P33308; P34087; P34162; P35189; P36100; P36145; P38304; P38633; P38782; P38902; P40422; P41895; P41896; Q00578; Q02939; Q08278; Q12343; Q3E7C1; Q99278;	3-133	100.0	8×ZN; 1×MG;
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	Structure of the mediator MED7/MED21 (Med7/Srb7) subcomplex	1ykh PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q08278;	2-130	97.37
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2 SWISS-MODEL models

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	8cen.1.h	monomer	0.78	3-138		100.00
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	8pqz.1.J	monomer	0.67	50-119		11.69
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

Alignments