P53145 | SWISS-MODEL Repository

P53145 (LSG1_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Large subunit GTPase 1 UniProtKB InterPro STRING Interactive Modelling

640 aa; Sequence (Fasta) ; 1 identical sequence: Saccharomyces cerevisiae: N1P5E5

It is possible new templates exist for this target since these models were created.

Available Structures

8 Experimental Structures

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit	6n8o PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P38861; P41805; P49166; P49167; P87262; Q02256; Q02326; Q02753; Q12522; Q12690;	117-524	100.0
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	Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit	6n8n PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P38861; P49166; P49167; P87262; Q02256; Q02326; Q02753; Q12522; Q12690;	117-524	100.0
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	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	6rzz PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26785; P36105; P38061; P38344; P38861; P49166; P49167; P87262; Q02256; Q02326; Q02753; Q03862; Q12522; Q12690;	133-512	100.0	10×ZN;
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	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	6s05 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26785; P36105; P38061; P38861; P49166; P49167; P87262; Q02256; Q02326; Q02753; Q06709; Q12522; Q12690;	133-512	100.0	8×ZN;
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	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	6qik PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26785; P36105; P38061; P38861; P49166; P49167; P87262; Q02326; Q02753; Q06709; Q12522; Q12690;	133-512	100.0	7×ZN;
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	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	6ri5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26785; P36105; P38061; P38861; P41805; P49166; P49167; P87262; Q02326; Q02753; Q06709; Q12522; Q12690;	133-512	100.0	7×ZN;
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	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	6qtz PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26785; P36105; P38061; P38861; P41805; P49166; P49167; P87262; Q02326; Q02753; Q06709; Q12522; Q12690;	133-512	100.0	7×ZN;
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	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis…	5t62 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02406; P04449; P04456; P04650; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C0W9; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX45; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P38861; P41805; P49166; P49167; P87262; Q02326; Q02753; Q12522; Q12690;	139-503	78.76	160×MG; 2×K; 1×GNP;
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2 SWISS-MODEL models

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	6n8o.1.G	monomer	0.61	117-524		100.00
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	7v08.1.j	monomer	0.50	60-506	1×MG;	25.73
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

Alignments