P69348 | SWISS-MODEL Repository

P69348 (YOEB_ECOLI) Escherichia coli (strain K12)

Toxin YoeB UniProtKB InterPro STRING STRING Interactive Modelling

84 aa; Sequence (Fasta) ; 64 identical sequences

It is possible new templates exist for this target since these models were created.

Available Structures

8 Experimental Structures

Description	PDB ID	Oligo-state	Range	Ligands
Crystal structure of YefM-YoeB complex	2a6q SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P69346;	1-84
Assess
Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)	6otr SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer J7QFC0; P0DOY6; P0DOY7; P0DOY8; P0DOY9; P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9Z9H5;	1-84	410×MG; 1×SF4; 3×ZN; 1×A3P;
Assess
Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)	6oxa SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer J7QFC0; P0DOY6; P0DOY7; P0DOY8; P0DOY9; P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9Z9H5;	1-84	420×MG; 1×SF4; 5×ZN;
Assess
Structure of Thermus thermophilus ribosome	4v8x SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P0DOY6; P0DOY7; P0DOY8; P0DOY9; P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP7; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9Z9H5;	1-84	352×MG; 2×ZN;
Assess
Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)	6oxi SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer J7QFC0; P0DOY6; P0DOY7; P0DOY8; P0DOY9; P17291; P35871; P60405; P60488; P60489; P60490; P60491; P60492; P60493; P60494; P80339; P80340; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHN8; Q5SHN9; Q5SHP0; Q5SHP2; Q5SHP3; Q5SHP6; Q5SHP8; Q5SHP9; Q5SHQ0; Q5SHQ4; Q5SHQ5; Q5SHQ6; Q5SHQ7; Q5SHR2; Q5SHZ1; Q5SIH3; Q5SJ76; Q5SJE1; Q5SJH3; Q5SKU1; Q5SLP8; Q5SLQ0; Q5SLQ1; Q9Z9H5;	1-84	419×MG; 1×SF4; 5×ZN;
Assess
Structure of dimeric Escherichia coli toxin YoeB bound to the Thermus thermophilus 30S ribosome	6ny6 SMTL PDBe PDBe-KB PDBj PDBsum RCSB	Heteromer P0DOY6; P0DOY7; P0DOY9; P17291; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHQ5; Q5SIH3; Q5SJ76; Q5SJH3; Q5SLP8; Q5SLQ0;	1-84	184×MG; 1×SF4; 1×ZN;
Assess
Crystal structure of YoeB under PEG condition	2a6r SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-84	1×MG;
Assess
Crystal structure of YoeB under isopropanol condition	2a6s SMTL PDBe PDBe-KB PDBj PDBsum RCSB	monomer	1-83	1×IPA;
Assess

1 SWISS-MODEL model

Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
2a6r.3.A	monomer	0.83	1-83		100.00
Assess

Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

Alignments