P76318 | SWISS-MODEL Repository

P76318 (YEDK_ECOLI) Escherichia coli (strain K12)

Abasic site processing protein YedK UniProtKB InterPro STRING Interactive Modelling

222 aa; Sequence (Fasta) ; 1 identical sequence: Escherichia coli: A0A140N6T3

Available Structures

9 Experimental Structures

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	Crystal structure of yedK in complex with ssDNA containing abasic site	6kbx PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-222	100
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	Crystal structure of yedK with ssDNA containing an abasic site	6kij PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-222	100	1×PED; 1×GOL;
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	Non-covalent DNA-protein complex between E. coli YedK and ssDNA containing an abasic site analog	6nuh PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-222	100	1×BTB;
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	DNA-protein crosslink between E. coli YedK and ssDNA containing an abasic site	6nua PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-222	100
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	Crystal structure of yedK with ssDNA containing a tetrahydrofuran abasic site	6kbz PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-222	100	2×MG;
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	Crystal structure of yedK with ssDNA containing an abasic site	6kcq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-222	100
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	Covalent Schiff base complex of YedK C2A and abasic DNA	8d2m PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-222	99.55
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	Crystal structure of yedK	6kbu PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-222	100.0	1×GOL;
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	Crystal Structure of Hypothetical Protein YedK From Escherichia coli	2icu PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	3-222	100.0
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	6nuh.1.A	monomer	0.91	2-222	1×DG; 1×BTB;	100.00
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

Alignments