P78563 | SWISS-MODEL Repository

P78563 (RED1_HUMAN) Homo sapiens (Human)

Double-stranded RNA-specific editase 1 UniProtKB InterPro STRING Interactive Modelling

741 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6)

It is possible new templates exist for this target since these models were created.

Available Structures

12 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Human Adenosine Deaminase Acting on dsRNA (ADAR2-RD) bound to dsRNA containing an expanded cytidine…	9d5k PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	235-740	100	2×IHP; 2×ZN; 1×MG;
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Human Adenosine Deaminase Acting on dsRNA (ADAR2-RD) bound to dsRNA containing a G-G pair adjacent …	8e0f PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	235-740	100	2×IHP; 2×ZN;
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Dimer of Human Adenosine Deaminase Acting on dsRNA (ADAR2) mutant E488Q bound to dsRNA sequence der…	6vff PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	235-740	100	2×IHP; 2×ZN;
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Human Adenosine Deaminase Acting on dsRNA (ADAR2-RD) bound to dsRNA containing deoxyinosine at the …	9d5j PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	235-740	100	2×IHP; 2×ZN; 3×EDO;
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Human Adenosine Deaminase Acting on dsRNA (ADAR2-R2D) bound to dsRNA containing a G:3-deaza dA pair…	8e4x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	235-740	100	2×IHP; 2×ZN;
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Human Adenosine Deaminase Acting on dsRNA (ADAR2) mutant E488Q bound to dsRNA sequence derived from…	5ed1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	304-740	100	2×IHP; 2×ZN;
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Human Adenosine Deaminase Acting on dsRNA (ADAR2) bound to dsRNA sequence derived from S. cerevisia…	5hp2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	304-740	100	2×IHP; 2×ZN;
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Human Adenosine Deaminase Acting on dsRNA (ADAR2) bound to dsRNA sequence derived from S. cerevisia…	5hp3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	304-740	100	2×IHP; 2×ZN;
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Structure of Human Adenosine Deaminase Acting on dsRNA (ADAR2) bound to dsRNA containing a 2'-deoxy…	7kfn PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	317-740	100	2×IHP; 2×ZN;
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Crystal structure of the catalytic domain of an adenosine deaminase that acts on RNA (hADAR2) bound…	1zy7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	306-740	100.0	1×ZN; 1×IHP;
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Human Adenosine Deaminase Acting on dsRNA (ADAR2) mutant E488Q bound to dsRNA sequence derived from…	5ed2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	316-740	100	1×IHP; 1×ZN;
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Human ADAR2d E488Y mutant complexed with dsRNA containing an abasic site opposite the edited base	6d06 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	317-740	100	1×IHP; 1×ZN;
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	8e0f.1.A	homo-2-mer	0.81	235-740	2×IHP; 1×ZN;	99.79
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

5 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
Isoform 2	8e0f.1.A	homo-2-mer	0.84	235-700	2×IHP; 1×ZN;	99.79
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Isoform 3	8e0f.1.A	homo-2-mer	0.79	235-713	1×ZN;	99.55
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Isoform 4	8e0f.1.A	homo-2-mer	0.83	263-728	2×IHP; 1×ZN;	99.79
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Isoform 5	8e0f.1.B	monomer	0.79	284-789	1×IHP; 1×ZN;	99.79
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Isoform 6	8e0f.1.A	homo-2-mer	0.82	235-673	1×ZN;	99.55
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P78563 (RED1_HUMAN) Homo sapiens (Human)

Double-stranded RNA-specific editase 1 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

12 Experimental Structures

1 SWISS-MODEL model

5 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

Double-stranded RNA-specific editase 1 UniProtKB InterPro STRING Interactive Modelling