P89876 (POLG_LMVE) Lettuce mosaic virus (strain E) (LMV)

Genome polyprotein UniProtKBInterProInteractive Modelling

3255 aa; Sequence (Fasta)

Molecule Processing
P1 proteinase
Helper component proteinase
Protein P3
6 kDa protein 1
Cytoplasmic inclusion protein
6 kDa protein 2
Viral genome-linked protein
Nuclear inclusion protein A
Nuclear inclusion protein B
Capsid protein

Sequence Features

Add
 345For P1 proteinase activity
 354For P1 proteinase activity
 388For P1 proteinase activity
 781For helper component proteinase activity
 854For helper component proteinase activity
 2260For nuclear inclusion protein A activity
 2295For nuclear inclusion protein A activity
 2365For nuclear inclusion protein A activity
 1410-1417ATP
 437-438Cleavage; by P1 proteinase
 895-896Cleavage; by autolysis
 1273-1274Cleavage; by NIa-pro
 1325-1326Cleavage; by NIa-pro
 1968-1969Cleavage; by NIa-pro
 2021-2022Cleavage; by NIa-pro
 2214-2215Cleavage; by NIa-pro
 2457-2458Cleavage; by NIa-pro
 2977-2978Cleavage; by NIa-pro
 188-436Peptidase S30, polyprotein P1, potyvirus
IPR002540PF01577
 462-895Helper component proteinase
IPR001456PF00851
 938-1376Potyviral polyprotein protein 3
IPR039560PF13608
 1402-1535DEAD/DEAH box helicase domain
IPR011545PF00270
 1570-1684Helicase, C-terminal
IPR001650PF00271
 1710-1991Polyprotein, Potyviridae
IPR013648PF08440
 2213-2446Potyvirus NIa protease (NIa-pro) domain
IPR001730PF00863
 2502-2915RNA-directed RNA polymerase, C-terminal domain
IPR001205PF00680
 3020-3252Potyvirus coat protein
IPR001592PF00767

Sequence Alignments

Cytoplasmic inclusion protein 1326-1968; PRO_0000040283

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer -4.855lta.1.A1354-1841
19.33
Assess