P9WGY7 (RPOC_MYCTU) Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
DNA-directed RNA polymerase subunit beta' UniProtKBInterProSTRINGInteractive Modelling
1316 aa; Sequence (Fasta) Identical sequences: Mycobacterium tuberculosis: A5U053; Mycobacterium tuberculosis variant africanum: A0A109SUD8; Mycobacterium bovis: P0A675; A0A679LCH0; Mycobacterium tuberculosis variant pinnipedii: A0A328GV20; Mycobacterium tuberculosis: A0A045J9E2; Mycobacterium orygis: A0A501P5P6
Sequence Features
| 60 | Zinc 1 | ||
| 62 | Zinc 1 | ||
| 75 | Zinc 1 | ||
| 78 | Zinc 1 | ||
| 535 | Magnesium | ||
| 537 | Magnesium | ||
| 539 | Magnesium | ||
| 891 | Zinc 2 | ||
| 968 | Zinc 2 | ||
| 975 | Zinc 2 | ||
| 978 | Zinc 2 | ||
| 7-417 | RNA polymerase Rpb1, domain 1 IPR007080PF04997 | ||
| 419-560 | RNA polymerase, alpha subunit IPR000722PF00623 | ||
| 564-736 | RNA polymerase Rpb1, domain 3 IPR007066PF04983 | ||
| 754-828 | RNA polymerase Rpb1, domain 4 IPR007083PF05000 | ||
| 843-1216 | RNA polymerase Rpb1, domain 5 IPR007081PF04998 |
Sequence Alignments
Experimental structures
| Description | Oligo-state | Ligands | Structure | Range |
|---|---|---|---|---|
| Mtb RNAP Holo/RbpA/double fork DNA -closed clamp |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; | 2×ZN; 1×MG; | 6c04 | |
| Assess | ||||
| Mycobacterium tuberculosis RNAP promoter unwinding intermediate complex with RbpA/CarD and AP3 prom… |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 1×C0L; 2×ZN; 1×MG; | 6eec | |
| Assess | ||||
| Mycobacterium tuberculosis RNAP promoter unwinding intermediate complex with RbpA/CarD and AP3 prom… |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 2×ZN; 1×MG; | 6ee8 | |
| Assess | ||||
| Mycobacterium tuberculosis RNAP open promoter complex with RbpA/CarD and AP3 promoter |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 2×ZN; 1×MG; | 6edt | |
| Assess | ||||
| Mycobacterium tuberculosis RNAP with RbpA/us fork and Corallopyronin |
Heteromer A5U8D3; P9WGI1; P9WGY5; P9WGY9; P9WHJ5; | 2×ZN; 1×MG; 1×C0L; | 6m7j | |
| Assess | ||||
| Mycobacterium tuberculosis RNAP S456L mutant transcription initiation intermediate structure with S… |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 1×SRN; 2×ZN; 1×MG; | 6vvz | |
| Assess | ||||
| Mycobacterium tuberculosis RNAP S456L mutant open promoter complex |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 2×ZN; 1×MG; | 6vw0 | |
| Assess | ||||
| Mycobacterium tuberculosis WT RNAP transcription open promoter complex with Sorangicin |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 1×SRN; 2×ZN; 1×MG; | 6vvy | |
| Assess | ||||
| Mycobacterium tuberculosis WT RNAP transcription initiation intermediate structure with Sorangicin |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 1×SRN; 2×ZN; 1×MG; | 6vvx | |
| Assess | ||||
| Mycobacterium tuberculosis RNA polymerase holoenzyme with ECF sigma factor sigma H |
Heteromer P9WGH9; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; | 5zx3 | |
| Assess | ||||
| Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 7 nt |
Heteromer P9WGH9; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 6koo | |
| Assess | ||||
| Mycobacterium tuberculosis transcription initiation complex with ECF sigma factor sigma H and 6nt R… |
Heteromer P9WGH9; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 6jcx | |
| Assess | ||||
| Mycobacterium tuberculosis RNA polymerase transcription initiation open complex with a chimeric ECF… |
Heteromer P9WGG7; P9WGH9; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 6jcy | |
| Assess | ||||
| Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 9 nt |
Heteromer P9WGH9; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 6kop | |
| Assess | ||||
| Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 10 nt |
Heteromer P9WGH9; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 6koq | |
| Assess | ||||
| Mycobacterium tuberculosis RNA polymerase transcription initiation complex with ECF sigma factor si… |
Heteromer P9WGH9; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; | 5zx2 | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L… |
Heteromer P9WGH5; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; | 6dvc | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3 nt of… |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 5uh5 | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3nt RNA… |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 1×RFP; 2×ZN; 1×MG; | 5uhc | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L… |
Heteromer P9WGH5; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; | 6dvb | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L… |
Heteromer P9WGH5; P9WGY5; P9WGY9; P9WGZ1; | 1×MG; 2×ZN; | 6dv9 | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF selenomethioni… |
Heteromer P9WGH5; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; | 6dve | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2ntRNA … |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 1×RFP; 2×ZN; 1×MG; | 5uh6 | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor L… |
Heteromer P9WGH5; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; | 6dvd | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 5uha | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-… |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 1×RFP; 2×ZN; 1×MG; 1×88G; | 5uhg | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 4nt RNA… |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 1×RFP; 2×ZN; 1×MG; | 5uhd | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-… |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; 1×88G; | 5uhe | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 4nt RNA |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 5uh8 | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with Ri… |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 1×RFP; 2×ZN; 1×MG; | 5uhb | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with D-… |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; 1×88D; | 5uhf | |
| Assess | ||||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2nt RNA |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 5uh9 | |
| Assess | ||||
| Mycobacterium tuberculosis RNAP Holo/RbpA in relaxed state |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; | 2×ZN; 1×MG; | 6c05 | |
| Assess | ||||
| Mtb RNAP Holo/RbpA/Fidaxomicin/upstream fork DNA |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; | 1×FI8; 2×ZN; 1×MG; | 6bzo | |
| Assess | ||||
| Mycobacterium tuberculosis RNAP Holo/RbpA/Fidaxomicin |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; | 2×ZN; 1×MG; 1×FI8; | 6c06 | |
| Assess | ||||
| Single particle cryo em structure of Mycobacterium tuberculosis RNA polymerase in complex with Fida… |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; 1×FI8; | 6fbv | |
| Assess | ||||
| Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 5 nt |
Heteromer P9WGH9; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 6kon | |
| Assess | ||||
| Crystal structure of MTB sigma L transcription initiation complex with 9 nt long RNA primer |
Heteromer P9WGH5; P9WGY5; P9WGY9; P9WGZ1; | 6tyg | ||
| Assess | ||||
| Crystal structure of MTB sigma L transcription initiation complex with 5 nt long RNA primer |
Heteromer P9WGH5; P9WGY5; P9WGY9; P9WGZ1; | 6tye | ||
| Assess | ||||
| Crystal structure of MTB sigma L transcription initiation complex with 6 nt long RNA primer |
Heteromer P9WGH5; P9WGY5; P9WGY9; P9WGZ1; | 6tyf | ||
| Assess | ||||
| Crystal structure of beta'MtbSI of Mycobacterium tuberculosis RNA polymerase | homo-2-mer | 5uh7 | ||
| Assess | ||||