P9WGY7 (RPOC_MYCTU) Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
DNA-directed RNA polymerase subunit beta' UniProtKBInterProSTRINGInteractive Modelling
1316 aa; Sequence (Fasta) Identical sequences: Mycobacterium tuberculosis: A5U053; Mycobacterium tuberculosis variant africanum: A0A109SUD8; Mycobacterium bovis: P0A675; Mycobacterium tuberculosis variant pinnipedii: A0A328GV20; Mycobacterium tuberculosis: A0A045J9E2; Mycobacterium orygis: A0A501P5P6
Sequence Features
| 60 | Zinc 1. | ||
| 62 | Zinc 1. | ||
| 75 | Zinc 1. | ||
| 78 | Zinc 1. | ||
| 535 | Magnesium. | ||
| 537 | Magnesium. | ||
| 539 | Magnesium. | ||
| 891 | Zinc 2. | ||
| 968 | Zinc 2. | ||
| 975 | Zinc 2. | ||
| 978 | Zinc 2. | ||
| 7-417 | RNA polymerase Rpb1, domain 1 IPR007080PF04997 | ||
| 419-560 | RNA polymerase, alpha subunit IPR000722PF00623 | ||
| 564-736 | RNA polymerase Rpb1, domain 3 IPR007066PF04983 | ||
| 754-828 | RNA polymerase Rpb1, domain 4 IPR007083PF05000 | ||
| 843-1216 | RNA polymerase Rpb1, domain 5 IPR007081PF04998 |
Sequence Alignments
Experimental structures
| Description | Oligo-state | Ligands | Structure | Range | Download | Assess |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis RNAP open promoter complex with RbpA/CarD and AP3 promoter |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 2×ZN; 1×MG; | 6edt | |||
| Mtb RNAP Holo/RbpA/double fork DNA -closed clamp |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; | 2×ZN; 1×MG; | 6c04 | |||
| 'Mycobacterium tuberculosis RNAP promoter unwinding intermediate complex with RbpA/CarD and AP3 p... |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 2×ZN; 1×MG; | 6ee8 | |||
| 'Mycobacterium tuberculosis RNAP promoter unwinding intermediate complex with RbpA/CarD and AP3 p... |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; P9WJG3; | 2×ZN; 1×C0L; 1×MG; | 6eec | |||
| Mycobacterium tuberculosis RNAP with RbpA/us fork and Corallopyronin |
Heteromer A5U8D3; P9WGI1; P9WGY5; P9WGY9; P9WHJ5; | 2×ZN; 1×C0L; 1×MG; | 6m7j | |||
| Mycobacterium tuberculosis RNA polymerase holoenzyme with ECF sigma factor sigma H |
Heteromer P9WGH9; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; | 5zx3 | |||
| 'Mycobacterium tuberculosis transcription initiation complex with ECF sigma factor sigma H and 6n... |
Heteromer P9WGH9; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 6jcx | |||
| 'Mycobacterium tuberculosis RNA polymerase transcription initiation open complex with a chimeric ... |
Heteromer P9WGG7; P9WGH9; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 6jcy | |||
| 'Mycobacterium tuberculosis RNA polymerase transcription initiation complex with ECF sigma factor... |
Heteromer P9WGH9; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; | 5zx2 | |||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor... |
Heteromer P9WGH5; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; | 6dvc | |||
| 'Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3 nt... |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 5uh5 | |||
| 'Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 3nt ... |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×RFP; 1×MG; | 5uhc | |||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor... |
Heteromer P9WGH5; P9WGY5; P9WGY9; P9WGZ1; | 1×MG; 2×ZN; | 6dv9 | |||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor... |
Heteromer P9WGH5; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; | 6dvb | |||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF selenomethio... |
Heteromer P9WGH5; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; | 6dve | |||
| 'Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2ntR... |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×RFP; 1×MG; | 5uh6 | |||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex(ECF sigma factor... |
Heteromer P9WGH5; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; | 6dvd | |||
| Crystal structure of Mycobacterium tuberculosis transcription initiation complex |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 5uha | |||
| 'Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with... |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×RFP; 1×88G; 1×MG; | 5uhg | |||
| 'Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 4nt ... |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×RFP; 1×MG; | 5uhd | |||
| 'Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with... |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×88G; 1×MG; | 5uhe | |||
| 'Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 4nt ... |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 5uh8 | |||
| 'Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with... |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×RFP; 1×MG; | 5uhb | |||
| 'Crystal structure of Mycobacterium tuberculosis transcription initiation complex in complex with... |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; 1×88D; | 5uhf | |||
| 'Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2nt ... |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×MG; | 5uh9 | |||
| Mtb RNAP Holo/RbpA/Fidaxomicin/upstream fork DNA |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; | 1×MG; 1×FI8; 2×ZN; | 6bzo | |||
| Mycobacterium tuberculosis RNAP Holo/RbpA in relaxed state |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; | 2×ZN; 1×MG; | 6c05 | |||
| Mycobacterium tuberculosis RNAP Holo/RbpA/Fidaxomicin |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; P9WHJ5; | 2×ZN; 1×FI8; 1×MG; | 6c06 | |||
| 'Single particle cryo em structure of Mycobacterium tuberculosis RNA polymerase in complex with F... |
Heteromer P9WGI1; P9WGY5; P9WGY9; P9WGZ1; | 2×ZN; 1×FI8; 1×MG; | 6fbv | |||
| Crystal structure of beta'MtbSI of Mycobacterium tuberculosis RNA polymerase | homo-2-mer | 5uh7 |
Homology models
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Report | Download | Assess |
|---|---|---|---|---|---|---|---|---|
| monomer | 1×MG; | -4.54 | 3dxj.1.D | 50.83 |