Q00341 (VIGLN_HUMAN) Homo sapiens (Human)
Vigilin UniProtKBInterProSTRINGInteractive Modelling
1268 aa; Sequence (Fasta) ; (Isoform 2; )
It is possible new templates exist for this target since these models were created.
Sequence Features
| 61 | S -> A (in dbSNP:rs11891776) VAR_047976 dbSNP | ||
| 229 | V -> I (in dbSNP:rs7572799) VAR_055981 dbSNP | ||
| 418 | N -> S (in dbSNP:rs7578199) VAR_024511 dbSNP | ||
| 568 | K -> N (in a breast cancer sample; somatic mutation) VAR_036052 | ||
| 939 | D -> V (in a breast cancer sample; somatic mutation) VAR_036053 | ||
| 1264 | W -> L (in dbSNP:rs12281) VAR_029279 dbSNP | ||
| 154-212 | K Homology domain, type 1 IPR004088PF00013 | ||
| 225-285 | K Homology domain, type 1 IPR004088PF00013 | ||
| 298-357 | K Homology domain, type 1 IPR004088PF00013 | ||
| 369-425 | K Homology domain, type 1 IPR004088PF00013 | ||
| 438-498 | K Homology domain, type 1 IPR004088PF00013 | ||
| 512-571 | K Homology domain, type 1 IPR004088PF00013 | ||
| 584-644 | K Homology domain, type 1 IPR004088PF00013 | ||
| 656-717 | K Homology domain, type 1 IPR004088PF00013 | ||
| 732-791 | K Homology domain, type 1 IPR004088PF00013 | ||
| 804-865 | K Homology domain, type 1 IPR004088PF00013 | ||
| 877-968 | K Homology domain, type 1 IPR004088PF00013 | ||
| 974-1034 | K Homology domain, type 1 IPR004088PF00013 | ||
| 1056-1118 | K Homology domain, type 1 IPR004088PF00013 | ||
| 1131-1191 | K Homology domain, type 1 IPR004088PF00013 |
Sequence Alignments
Experimental structures
| Description | Oligo-state | Ligands | Structure | Range |
|---|---|---|---|---|
| Solution structure of the 12th KH type I domain from human Vigilin | monomer | 2ctk | ||
| Assess | ||||
| Solution structure of the 4th KH type I domain from human Vigilin | monomer | 2ctf | ||
| Assess | ||||
| Solution structure of the 13th KH type I domain from human Vigilin | monomer | 2ctl | ||
| Assess | ||||
| Solution structure of the 8th KH type I domain from human Vigilin | monomer | 2ctj | ||
| Assess | ||||
| Solution structure of the 14th KH type I domain from human Vigilin | monomer | 2ctm | ||
| Assess | ||||
| Solution structure of the 1st KH type I domain from human Vigilin | monomer | 2cte | ||
| Assess | ||||
| NMR STUDY OF VIGILIN, REPEAT 6, 40 STRUCTURES | monomer | 1vig | ||
| Assess | ||||
| NMR STUDY OF VIGILIN, REPEAT 6, MINIMIZED AVERAGE STRUCTURE | monomer | 1vih | ||
| Assess | ||||
Homology models
| Oligo-state | QMEAN | Template | Range | Seq id (%) | Ligands |
|---|---|---|---|---|---|
| monomer | 1.10 | 2anr.1.B | 21.99 | ||
| Assess | |||||
| monomer | -0.22 | 6gqe.1.A | 24.65 | ||
| Assess | |||||
| monomer | 0.57 | 1j4w.1.B | 25.36 | ||
| Assess | |||||
| monomer | -0.83 | 2jvz.1.A | 23.94 | ||
| Assess | |||||
| monomer | -1.80 | 5wyk.1.5 | 11.43 | ||
| Assess | |||||
| monomer | -0.44 | 1j4w.1.B | 22.79 | ||
| Assess | |||||
| monomer | 0.56 | 6rol.3.A | 20.55 | ||
| Assess | |||||
| monomer | -0.26 | 2jvz.1.A | 19.86 | ||
| Assess | |||||
| monomer | -2.75 | 6g5i.1.7 | 21.05 | ||
| Assess | |||||
| monomer | -4.11 | 3n89.1.A | 14.89 | ||
| Assess | |||||
| monomer | -3.73 | 3n89.1.A | 14.61 | ||
| Assess | |||||
| monomer | -4.43 | 3n89.1.A | 12.18 | ||
| Assess | |||||
| monomer | -4.45 | 2e3u.1.A | 17.57 | ||
| Assess | |||||
| monomer | -4.89 | 3n89.2.A | 14.47 | ||
| Assess | |||||
Homology models built on isoform sequence
| Isoform | Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|---|
| Isoform 2 | monomer | 0.67 | 2anr.1.B | 21.99 | ||
| Assess | ||||||
| Isoform 2 | monomer | -0.13 | 6gqe.1.A | 24.82 | ||
| Assess | ||||||
| Isoform 2 | monomer | -0.29 | 1tua.1.A | 22.73 | ||
| Assess | ||||||
| Isoform 2 | monomer | 0.58 | 1j4w.1.B | 25.36 | ||
| Assess | ||||||
| Isoform 2 | monomer | 0.61 | 2e3u.1.A | 23.88 | ||
| Assess | ||||||
| Isoform 2 | monomer | 0.53 | 6rol.3.A | 20.55 | ||
| Assess | ||||||
| Isoform 2 | monomer | -0.80 | 2jvz.1.A | 23.94 | ||
| Assess | ||||||
| Isoform 2 | monomer | -0.48 | 1j4w.1.B | 22.79 | ||
| Assess | ||||||
| Isoform 2 | monomer | -1.89 | 5wyk.1.5 | 12.06 | ||
| Assess | ||||||
| Isoform 2 | monomer | -0.29 | 2jvz.1.A | 19.86 | ||
| Assess | ||||||
| Isoform 2 | monomer | -1.31 | 1j4w.1.B | 18.98 | ||
| Assess | ||||||
| Isoform 2 | monomer | -4.11 | 3n89.1.A | 16.21 | ||
| Assess | ||||||
| Isoform 2 | monomer | -3.58 | 3n89.1.A | 14.56 | ||
| Assess | ||||||
| Isoform 2 | monomer | -4.71 | 3n89.1.A | 12.14 | ||
| Assess | ||||||
| Isoform 2 | monomer | -4.80 | 3n89.2.A | 14.52 | ||
| Assess | ||||||