Q00653 (NFKB2_HUMAN) Homo sapiens (Human)

Nuclear factor NF-kappa-B p100 subunit UniProtKBInterProSTRINGInteractive Modelling

900 aa; Sequence (Fasta) ; (Isoform 3; Isoform 4; )

Molecule Processing
Nuclear factor NF-kappa-B p52 subunit

Sequence Features

 14E -> K (in dbSNP:rs45581936) VAR_022223 dbSNP
 351G -> R (in dbSNP:rs45580031) VAR_022224 dbSNP
 392A -> G (in dbSNP:rs11574848) VAR_051781 dbSNP
 452G -> R (in dbSNP:rs45471103) VAR_022225 dbSNP
 865D -> G (in CVID10; unknown pathological significance; de novo mutation; dbSNP:rs727502787) VAR_074035 dbSNP
 867A -> V (in CVID10; unknown pathological significance; de novo mutation; dbSNP:rs727502788) VAR_074036 dbSNP
 454-455Cleavage (when cotranslationally processed)
 490-491Breakpoint for translocation to form NFKB2-IGHA1 oncogene
 618-900Missing (in truncated form EB308) VAR_018452
 667-669AGN -> SAS (in truncated form p80HT) VAR_006909
 670-900Missing (in truncated form p80HT) VAR_006910
 703-900Missing (in truncated form LB40) VAR_018453
 40-220Rel homology domain (RHD), DNA-binding domain
IPR011539PF00554
 229-327Rel homology dimerisation domain
IPR032397PF16179
 480-553Ankyrin repeat-containing domain
IPR020683PF12796
 605-697Ankyrin repeat-containing domain
IPR020683PF12796
 776-847Death domain
IPR000488PF00531

Sequence Alignments

Nuclear factor NF-kappa-B p52 subunit 1-454; PRO_0000030322

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
X-ray structure of a NF-kB p52/RelB/DNA complex Heteromer
Q04863;
3do7 37-329
Structural Basis for Reactivation of -146C>T Mutant TERT Promoter by cooperative binding of p52 and… Heteromer
P14921;
5zmc 226-328
HUMAN NF-KAPPA-B P52 BOUND TO DNAhomo-2-mer 1a3q 37-327
Oligo-stateLigandsQMEANTemplateRangeSeq id (%)DownloadAssess
monomer -3.931nfi.1.A39-350
43.05

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
3monomer0.431ooa.1.C37-328
61.84
4monomer0.281ooa.1.B37-328
62.17
3monomer-4.281nfi.1.A39-350
42.71
4monomer-3.931nfi.1.A39-350
43.05
4monomer-3.145le7.2.A486-765
30.30
4monomer-4.684rlv.1.A473-850
24.14
4monomer-4.015le3.1.A486-765
29.92
4monomer-2.995le9.1.A483-765
30.94
4monomer-4.285jhq.1.A464-820
25.37
4monomer-4.275lec.1.A478-811
30.84
3monomer-3.533jss.1.A225-327
54.00