Q00653 (NFKB2_HUMAN) Homo sapiens (Human)

Nuclear factor NF-kappa-B p100 subunit UniProtKBInterProSTRINGInteractive Modelling

900 aa; Sequence (Fasta) ; (Isoform 3; Isoform 4; )

Molecule Processing
Nuclear factor NF-kappa-B p52 subunit

Sequence Features

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 14E -> K (in dbSNP:rs45581936) VAR_022223 dbSNP
 351G -> R (in dbSNP:rs45580031) VAR_022224 dbSNP
 392A -> G (in dbSNP:rs11574848) VAR_051781 dbSNP
 452G -> R (in dbSNP:rs45471103) VAR_022225 dbSNP
 865D -> G (in CVID10; unknown pathological significance; de novo mutation; dbSNP:rs727502787) VAR_074035 dbSNP
 867A -> V (in CVID10; unknown pathological significance; de novo mutation; dbSNP:rs727502788) VAR_074036 dbSNP
 454-455Cleavage (when cotranslationally processed)
 490-491Breakpoint for translocation to form NFKB2-IGHA1 oncogene
 618-900Missing (in truncated form EB308) VAR_018452
 667-669AGN -> SAS (in truncated form p80HT) VAR_006909
 670-900Missing (in truncated form p80HT) VAR_006910
 703-900Missing (in truncated form LB40) VAR_018453
 40-220Rel homology domain (RHD), DNA-binding domain
IPR011539PF00554
 229-327Rel homology dimerisation domain
IPR032397PF16179
 480-553Ankyrin repeat-containing domain
IPR020683PF12796
 605-697Ankyrin repeat-containing domain
IPR020683PF12796
 776-847Death domain
IPR000488PF00531

Sequence Alignments

Nuclear factor NF-kappa-B p52 subunit 1-454; PRO_0000030322

DescriptionOligo-stateLigandsStructureRange
X-ray structure of a NF-kB p52/RelB/DNA complex Heteromer
Q04863;
3do7 37-329
Assess
Structural Basis for Reactivation of -146C>T Mutant TERT Promoter by cooperative binding of p52 and… Heteromer
P14921;
5zmc 226-328
Assess
HUMAN NF-KAPPA-B P52 BOUND TO DNAhomo-2-mer 1a3q 37-327
Assess
Oligo-stateLigandsQMEANTemplateRangeSeq id (%)
monomer -3.431nfi.1.A39-350
42.57
Assess

Homology models built on isoform sequence

IsoformOligo-stateLigandsQMEANTemplateRangeSeq id (%)
Isoform 3monomer0.181ooa.1.B37-328
61.84
Assess
Isoform 3homo-2-mer-0.221a3q.1.C37-327
100.00
Assess
Isoform 3homo-2-mer-0.933juz.1.B225-328
54.46
Assess
Isoform 3monomer-3.051nfi.1.A39-350
42.62
Assess
Isoform 4homo-2-mer-4.684ot9.1.B435-756
100.00
Assess
Isoform 4monomer0.261ooa.1.B37-328
60.86
Assess
Isoform 4homo-2-mer-0.661svc.1.D38-328
60.52
Assess
Isoform 4monomer-3.431nfi.1.A39-350
42.57
Assess
Isoform 4monomer-1.875le2.1.A479-811
27.86
Assess
Isoform 4monomer-3.935led.1.A458-811
26.82
Assess
Isoform 4monomer-3.185leb.1.A467-810
27.19
Assess
Isoform 4monomer-2.735lee.1.A486-811
27.42
Assess
Isoform 4monomer-3.355y4f.2.A460-838
25.54
Assess
Isoform 4monomer-3.785jhq.3.A470-810
24.17
Assess