Q01196 (RUNX1_HUMAN) Homo sapiens (Human)

Runt-related transcription factor 1 UniProtKBInterProSTRINGInteractive Modelling

453 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; Isoform 7; Isoform 8; Isoform 9; Isoform 10; Isoform 11; ) Identical sequences: Pan troglodytes: H2RAI7

Sequence Features

 139R -> Q (in FPDMM; dbSNP:rs1060499616). VAR_012128 dbSNP
 174R -> Q (in FPDMM; impaired phosphorylation; dbSNP:rs74315450). VAR_012129 dbSNP
 431S -> R (in dbSNP:rs1055308). VAR_013177 dbSNP
 433S -> R (in dbSNP:rs1055309). VAR_013178 dbSNP
 177-178Breakpoint for translocation to form AML1-EMV-1 (or AML1-EAP) in CML and T- MDS, to form AML1-MTG8 (ETO) in AML-M2, to form AML1-CBFA2T3 in therapy-related myeloid malignancies, to form AML1-MECOM in CML and to form type I MACROD1-RUNX1 fusion protein.
 241-242Breakpoint for translocation to form AML1-EAP in T-MDS and CML, to form type II MACROD1-RUNX1 fusion protein and to form RUNX1-CBFA2T2 in acute myeloid leukemia.
 52-179Runt domain
IPR013524PF00853
 363-453Runx, C-terminal domain
IPR013711PF08504

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRangeDownloadAssess
Aml1/cbf-beta/dna complex Heteromer
Q13951;
1h9d54-178
AML1/CBFbeta complex Heteromer
Q13951;
1e5059-173
DNA recognition is mediated by conformational transition and by DNA bendinghomo-4-mer 10×CL;1ljm60-174
IMMUNOGLOBULIN MOTIF DNA-RECOGNITION AND HETERODIMERIZATION FOR THE PEBP2/CBF RUNT-DOMAINmonomer 1cmo52-178
FOLD OF THE CBFAmonomer 1co161-175

Homology models

Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
monomer -0.894l0z.1.A54-212
100.00
monomer -4.661b8x.1.A319-346
97.67

Homology models built on isoform sequence

Isoform #Oligo-stateLigandsQMEANTemplateRangeSeq id (%)ReportDownloadAssess
6monomer0.774l0y.1.A50-177
96.20
5monomer-1.324l18.1.A53-191
92.36
3monomer-1.024l0z.1.A54-212
99.59
4monomer-1.064l0z.1.A54-212
100.00
9monomer-0.994l0z.1.A57-215
100.00
10monomer-0.894l0z.1.A69-227
100.00
2monomer-0.964l0z.1.A54-212
100.00
8monomer-0.964l0z.1.A81-239
100.00
7monomer-1.694l0z.1.A54-179
100.00
11monomer-0.913wtt.1.A1-73
99.37
8monomer-4.661b8x.1.A346-373
97.67
11monomer-4.661b8x.1.A214-241
97.67
9monomer-4.661b8x.1.A322-349
97.67
10monomer-4.661b8x.1.A334-361
97.67
2monomer-4.661b8x.1.A319-346
97.67