Q01196 (RUNX1_HUMAN) Homo sapiens (Human)

Runt-related transcription factor 1 UniProtKBInterProSTRINGInteractive Modelling

453 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; Isoform 7; Isoform 8; Isoform 9; Isoform 10; Isoform 11; ) Identical sequences: Pan troglodytes: H2RAI7; A0A6D2W7X6

Sequence Features

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 139R -> Q (in FPDMM; dbSNP:rs1060499616) VAR_012128 dbSNP
 174R -> Q (in FPDMM; impaired phosphorylation; dbSNP:rs74315450) VAR_012129 dbSNP
 431S -> R (in dbSNP:rs1055308) VAR_013177 dbSNP
 433S -> R (in dbSNP:rs1055309) VAR_013178 dbSNP
 177-178Breakpoint for translocation to form AML1-EMV-1 (or AML1-EAP) in CML and T-MDS, to form AML1-MTG8 (ETO) in AML- M2, to form AML1-CBFA2T3 in therapy-related myeloid malignancies, to form AML1-MECOM in CML and to form type I MACROD1-RUNX1 fusion protein
 241-242Breakpoint for translocation to form AML1-EAP in T- MDS and CML, to form type II MACROD1-RUNX1 fusion protein and to form RUNX1-CBFA2T2 in acute myeloid leukemia
 52-179Runt domain
IPR013524PF00853
 362-453Runx, C-terminal domain
IPR013711PF08504

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
Aml1/cbf-beta/dna complex Heteromer
Q13951;
1h9d54-178
Assess
AML1/CBFbeta complex Heteromer
Q13951;
1e5059-173
Assess
DNA recognition is mediated by conformational transition and by DNA bendinghomo-4-mer 10×CL;1ljm60-174
Assess
IMMUNOGLOBULIN MOTIF DNA-RECOGNITION AND HETERODIMERIZATION FOR THE PEBP2/CBF RUNT-DOMAINmonomer 1cmo52-178
Assess
FOLD OF THE CBFAmonomer 1co161-175
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -1.43 4l0z.1.A54-212
100.00
Assess
monomer -5.88 1b8x.1.A315-346
89.36
Assess

Homology models built on isoform sequence

IsoformOligo-stateLigandsQMEANTemplateRangeSeq id (%)
Isoform 2monomer-1.424l0z.1.A54-212
100.00
Assess
Isoform 2monomer-5.881b8x.1.A315-346
89.36
Assess
Isoform 3monomer-1.434l0z.1.A54-212
99.59
Assess
Isoform 4monomer-1.414l0z.1.A54-212
100.00
Assess
Isoform 5monomer0.754l0y.1.A50-177
92.78
Assess
Isoform 6monomer0.784l0y.1.A50-177
97.25
Assess
Isoform 7monomer-3.203wu1.1.A55-183
73.11
Assess
Isoform 7monomer-1.684l0z.1.A54-179
100.00
Assess
Isoform 8monomer-1.424l0z.1.A81-239
98.74
Assess
Isoform 8monomer-5.881b8x.1.A342-373
89.36
Assess
Isoform 9monomer-1.444l0z.1.A57-215
98.74
Assess
Isoform 9monomer-5.881b8x.1.A318-349
89.36
Assess
Isoform 10monomer-1.504l0z.1.A69-227
99.15
Assess
Isoform 10monomer-5.881b8x.1.A330-361
89.36
Assess
Isoform 11monomer-0.553wtu.2.A1-72
98.73
Assess
Isoform 11monomer-5.881b8x.1.A210-241
89.36
Assess