Q01196 (RUNX1_HUMAN) Homo sapiens (Human)
Runt-related transcription factor 1 UniProtKBInterProSTRINGInteractive Modelling
453 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; Isoform 7; Isoform 8; Isoform 9; Isoform 10; Isoform 11; ) Identical sequences: Pan troglodytes: H2RAI7
It is possible new templates exist for this target since these models were created.
Sequence Features
| 139 | R -> Q (in FPDMM; dbSNP:rs1060499616). VAR_012128 dbSNP | ||
| 174 | R -> Q (in FPDMM; impaired phosphorylation; dbSNP:rs74315450). VAR_012129 dbSNP | ||
| 431 | S -> R (in dbSNP:rs1055308). VAR_013177 dbSNP | ||
| 433 | S -> R (in dbSNP:rs1055309). VAR_013178 dbSNP | ||
| 177-178 | Breakpoint for translocation to form AML1-EMV-1 (or AML1-EAP) in CML and T- MDS, to form AML1-MTG8 (ETO) in AML-M2, to form AML1-CBFA2T3 in therapy-related myeloid malignancies, to form AML1-MECOM in CML and to form type I MACROD1-RUNX1 fusion protein. | ||
| 241-242 | Breakpoint for translocation to form AML1-EAP in T-MDS and CML, to form type II MACROD1-RUNX1 fusion protein and to form RUNX1-CBFA2T2 in acute myeloid leukemia. | ||
| 52-179 | Runt domain IPR013524PF00853 | ||
| 363-453 | Runx, C-terminal domain IPR013711PF08504 |
Sequence Alignments
Experimental structures
| Description | Oligo-state | Ligands | Structure | Range | Download | Assess |
|---|---|---|---|---|---|---|
| Aml1/cbf-beta/dna complex |
Heteromer Q13951; | 1h9d | ||||
| AML1/CBFbeta complex |
Heteromer Q13951; | 1e50 | ||||
| DNA recognition is mediated by conformational transition and by DNA bending | homo-4-mer | 10×CL; | 1ljm | |||
| IMMUNOGLOBULIN MOTIF DNA-RECOGNITION AND HETERODIMERIZATION FOR THE PEBP2/CBF RUNT-DOMAIN | monomer | 1cmo | ||||
| FOLD OF THE CBFA | monomer | 1co1 |
Homology models
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Report | Download | Assess |
|---|---|---|---|---|---|---|---|---|
| monomer | -0.89 | 4l0z.1.A | 100.00 | |||||
| monomer | -4.66 | 1b8x.1.A | 97.67 |
Homology models built on isoform sequence
| Isoform # | Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) | Report | Download | Assess |
|---|---|---|---|---|---|---|---|---|---|
| 6 | monomer | 0.77 | 4l0y.1.A | 96.20 | |||||
| 5 | monomer | -1.32 | 4l18.1.A | 92.36 | |||||
| 3 | monomer | -1.02 | 4l0z.1.A | 99.59 | |||||
| 4 | monomer | -1.06 | 4l0z.1.A | 100.00 | |||||
| 9 | monomer | -0.99 | 4l0z.1.A | 100.00 | |||||
| 10 | monomer | -0.89 | 4l0z.1.A | 100.00 | |||||
| 2 | monomer | -0.96 | 4l0z.1.A | 100.00 | |||||
| 8 | monomer | -0.96 | 4l0z.1.A | 100.00 | |||||
| 7 | monomer | -1.69 | 4l0z.1.A | 100.00 | |||||
| 11 | monomer | -0.91 | 3wtt.1.A | 99.37 | |||||
| 8 | monomer | -4.66 | 1b8x.1.A | 97.67 | |||||
| 11 | monomer | -4.66 | 1b8x.1.A | 97.67 | |||||
| 9 | monomer | -4.66 | 1b8x.1.A | 97.67 | |||||
| 10 | monomer | -4.66 | 1b8x.1.A | 97.67 | |||||
| 2 | monomer | -4.66 | 1b8x.1.A | 97.67 |