Q01404 (POLG_HCVH4) Hepatitis C virus (isolate HCV-476) (HCV)
Genome polyprotein UniProtKBInterProInteractive Modelling
523 aa; Sequence (Fasta)
Molecule Processing
| Core protein precursor | |
| Mature core protein | |
| Envelope glycoprotein E1 | |
| Envelope glycoprotein E2 |
It is possible new templates exist for this target since these models were created.
Sequence Features
| 169-189 | Helical | ||
| 359-379 | Helical | ||
| 177-178 | Cleavage; by host signal peptide peptidase | ||
| 191-192 | Cleavage; by host signal peptidase | ||
| 383-384 | Cleavage; by host signal peptidase | ||
| 2-115 | Hepatitis C virus core protein, N-terminal IPR002522PF01543 | ||
| 116-190 | Hepatitis C virus core protein, C-terminal IPR002521PF01542 | ||
| 193-382 | Hepatitis C virus envelope glycoprotein E1 IPR002519PF01539 | ||
| 387-522 | Hepatitis C virus non-structural protein E2/NS1 IPR002531PF01560 |
Sequence Alignments
Core protein precursor 2-191; PRO_0000037578
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | -6.16 | 1xcq.4.A | 97.73 | ||
| Assess | |||||
| monomer | -4.81 | 1cwx.1.A | 97.73 | ||
| Assess | |||||
Mature core protein 2-177; PRO_0000037579
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | -6.16 | 1xcq.4.A | 97.73 | ||
| Assess | |||||
| monomer | -4.81 | 1cwx.1.A | 97.73 | ||
| Assess | |||||
Envelope glycoprotein E1 192-383; PRO_0000037581
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | -1.98 | 4uoi.3.B | 70.89 | ||
| Assess | |||||
| monomer | -3.27 | 2knu.1.A | 93.10 | ||
| Assess | |||||
Envelope glycoprotein E2 384-523; PRO_0000037582
| Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
|---|---|---|---|---|---|
| monomer | -3.67 | 6mej.1.C | 71.01 | ||
| Assess | |||||