Q02548 (PAX5_HUMAN) Homo sapiens (Human)

Paired box protein Pax-5 UniProtKBInterProSTRINGInteractive Modelling

391 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; Isoform 5; Isoform 6; Isoform 7; Isoform 8; Isoform 9; Isoform 10; Isoform 11; ) 12 identical sequences

Sequence Features

Add
 24G -> R (in dbSNP:rs868494257) VAR_070672 dbSNP
 26V -> G (in dbSNP:rs926053251) VAR_070673 dbSNP
 34P -> Q VAR_070674
 53D -> V VAR_070675
 59R -> G VAR_070676
 66S -> N VAR_070677
 75T -> R VAR_070678
 80P -> R VAR_070679
 139I -> T VAR_070680
 151V -> I (in dbSNP:rs115889954) VAR_070681 dbSNP
 183G -> S (in ALL3; confers susceptibility to ALL3; reduced transcription factor activity; dbSNP:rs398123063) VAR_070682 dbSNP
 183G -> V VAR_070683
 213S -> L (in dbSNP:rs137870876) VAR_070684 dbSNP
 301I -> T (in dbSNP:rs372989600) VAR_070685 dbSNP
 322A -> T (in dbSNP:rs34810717) VAR_034370 dbSNP
 338G -> V VAR_070686
 16-142Paired
 158-159Breakpoint for translocation to form PAX5-ETV6
 260-261Breakpoint for translocation to form PAX5-FOXP1
 303-304Breakpoint for translocation to form PAX5-ZNF521
 16-140Paired domain
IPR001523PF00292
 284-390Paired-box protein 2 C-terminal
IPR022130PF12403

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
Pax5(1-149)+Ets-1(331-440)+DNA Heteromer
P27577;
1k7819-142
Assess
INHIBITED FRAGMENT OF ETS-1 AND PAIRED DOMAIN OF PAX5 BOUND TO DNA Heteromer
P27577;
1mdm19-142
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -3.26 2k27.1.A13-148
91.91
Assess

Homology models built on isoform sequence

IsoformOligo-stateLigandsQMEANTemplateRangeSeq id (%)
Isoform 2monomer0.631k78.2.C19-142
100.00
Assess
Isoform 2monomer-3.272k27.1.A13-148
91.91
Assess
Isoform 2monomer-4.472h8r.1.D91-278
11.11
Assess
Isoform 3monomer0.601k78.2.C19-142
100.00
Assess
Isoform 3monomer-3.292k27.1.A13-148
91.91
Assess
Isoform 4monomer0.601k78.2.C19-142
100.00
Assess
Isoform 4monomer-3.292k27.1.A13-148
91.91
Assess
Isoform 4monomer-4.812h8r.1.C91-259
9.94
Assess
Isoform 4monomer-2.456cnb.1.P32-145
12.73
Assess
Isoform 5monomer0.621k78.2.C19-142
100.00
Assess
Isoform 5monomer-3.342k27.1.A14-150
91.97
Assess
Isoform 5monomer-3.952h8r.1.C91-257
10.69
Assess
Isoform 6monomer0.581k78.2.C19-142
100.00
Assess
Isoform 6monomer-3.292k27.1.A13-148
91.91
Assess
Isoform 6monomer-4.842h8r.1.D91-278
10.56
Assess
Isoform 7monomer0.691k78.2.C19-142
100.00
Assess
Isoform 7monomer-3.232k27.1.A13-148
91.91
Assess
Isoform 8monomer0.581k78.2.C19-142
100.00
Assess
Isoform 8monomer-3.272k27.1.A13-148
91.91
Assess
Isoform 8monomer-4.506f40.1.P33-146
13.39
Assess
Isoform 8monomer-2.206m3d.1.C89-236
11.86
Assess
Isoform 8monomer-4.172h8r.1.D91-235
8.28
Assess
Isoform 9monomer0.591k78.2.C19-142
100.00
Assess
Isoform 9monomer-3.282k27.1.A13-148
91.91
Assess
Isoform 9monomer-4.496f40.1.P33-146
13.39
Assess
Isoform 9monomer-2.286m3d.1.C89-236
11.86
Assess
Isoform 9monomer-4.182h8r.1.D91-235
8.28
Assess
Isoform 10monomer-0.201mdm.1.C19-80
91.25
Assess
Isoform 11monomer0.621k78.2.C19-142
100.00
Assess
Isoform 11monomer-3.342k27.1.A14-150
91.97
Assess
Isoform 11monomer-3.652h8r.1.C91-258
10.63
Assess