Q04311 | SWISS-MODEL Repository

Q04311 (VMS1_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

tRNA endonuclease VMS1 UniProtKB InterPro STRING Interactive Modelling

632 aa; Sequence (Fasta)

It is possible new templates exist for this target since these models were created.

Available Structures

4 Experimental Structures

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)	6r87 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q12522; Q12690; Q3E757;	13-529	100.0	1×ZN;
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	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)	6r84 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P40024; P41805; P49166; P49167; P87262; Q02326; Q02753; Q12522; Q12690; Q3E757;	13-529	100	1×ZN;
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	Yeast Vms1-60S ribosomal subunit complex (post-state)	6r86 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02406; P04449; P04456; P04650; P05317; P05737; P05738; P05740; P05743; P05744; P05745; P05747; P05748; P05749; P0C2H6; P0C2H8; P0CH08; P0CX23; P0CX25; P0CX27; P0CX41; P0CX43; P0CX45; P0CX49; P0CX53; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P26321; P26784; P36105; P38061; P41805; P49166; P49167; P87262; Q02326; Q02753; Q12522; Q12690; Q3E757;	13-529	100.0	1×ZN;
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	Vms1 mitochondrial localization core	5whg PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	13-397	100.0	1×ZN;
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2 SWISS-MODEL models

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	5whg.1.A	monomer	0.56	13-397	1×ZN;	100.00
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	6r86.1.A	monomer	0.53	13-538		91.97
	Download ModelCIF format PDB format Model report Compare Structure Assessment

	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

Alignments