Q13838 | SWISS-MODEL Repository

Q13838 (DX39B_HUMAN) Homo sapiens (Human)

Spliceosome RNA helicase DDX39B UniProtKB InterPro STRING Interactive Modelling

428 aa; Sequence (Fasta) ; (Isoform 2); 51 identical sequences

It is possible new templates exist for this target since these models were created.

Available Structures

9 Experimental Structures

	Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
	Crystal structure of UAP56 in complex with Tho1, the yeast homolog of human SARNP	8enk PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P40040;	44-424	100	2×ADP; 2×BEF; 2×MG;
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	Structure of an endogenous human TREX complex bound to mRNA	7znk PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q13769; Q6I9Y2; Q86V81; Q86W42; Q8NI27; Q96FV9; Q96J01;	52-425	100
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	Structure of the human TREX core THO-UAP56 complex	7znl PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q13769; Q6I9Y2; Q86W42; Q8NI27; Q96FV9; Q96J01;	256-425	100
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	Structure of the human THO - UAP56 complex	7apk PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q13769; Q6I9Y2; Q86W42; Q8NI27; Q96FV9; Q96J01;	256-425	100
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	Crystal structure of the N-terminal domain of human UAP56	1t6n PDBe PDBe-KB PDBj PDBsum RCSB SMTL	homo-2-mer	45-251	100	2×FLC;
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	structure of DECD to DEAD mutation of human UAP56	1xtk PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	46-427	99.74	1×BME;
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	Structure of Wildtype human UAP56	1xti PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	46-426	100	4×IPA;
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	structure of human UAP56 in complex with ADP	1xtj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	45-423	100.0	1×MG; 1×ADP; 1×ACY;
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	Crystal structure of the C-terminal domain of UAP56	1t5i PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	261-428	100.0
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5 SWISS-MODEL models

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	8iju.1.A	monomer	0.86	45-420		93.01
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	5suq.1.C	monomer	0.79	45-424		66.03
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	4ct5.1.A	monomer	0.73	47-423		36.83
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	5e7i.3.A	monomer	0.64	4-422		31.80
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	6o5f.1.A	monomer	0.63	4-423		31.80
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

6 SWISS-MODEL models built on isoform sequence

	Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	Isoform 2	8iju.1.A	monomer	0.83	45-435		92.75
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	Isoform 2	5suq.1.C	monomer	0.76	45-439		66.03
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	Isoform 2	4ct5.1.A	monomer	0.71	45-436		35.75
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	Isoform 2	4kbf.1.A	monomer	0.70	46-411		31.50
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	Isoform 2	4kbf.2.A	monomer	0.70	46-411		31.50
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	Isoform 2	2hxy.1.A	monomer	0.69	45-431		37.77
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Alignments