Q15542 | SWISS-MODEL Repository

Q15542 (TAF5_HUMAN) Homo sapiens (Human)

Transcription initiation factor TFIID subunit 5 UniProtKB InterPro STRING Interactive Modelling

It is possible new templates exist for this target since these models were created.

Available Structures

27 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
SCP promoter-bound TFIID-TFIIA in initial TBP-loading state	7egd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; P49848; P52655; P52657; Q12962; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	202-800	100.0
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TFIID in canonical conformation	7ege PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; P49848; Q12962; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	202-800	100.0
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TFIID in rearranged conformation	7egi PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; P49848; P52655; P52657; Q12962; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	202-800	100.0
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SCP promoter-bound TFIID-TFIIA in post TBP-loading state	7egj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; P49848; P52655; P52657; Q12962; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	202-800	100.0
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Structure of transcribing complex 2 (TC2), the initially transcribing complex with Pol II positione…	8wak PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	202-800	100.0	17×ZN; 1×SF4; 1×W0F; 1×MG;
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Structure of transcribing complex 3 (TC3), the initially transcribing complex with Pol II positione…	8wal PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	202-800	100.0	17×ZN; 1×SF4; 1×W0F; 1×MG;
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Structure of transcribing complex 4 (TC4), the initially transcribing complex with Pol II positione…	8wan PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	202-800	100.0	17×ZN; 1×SF4; 1×MG; 1×W0F;
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Structure of transcribing complex 5 (TC5), the initially transcribing complex with Pol II positione…	8wao PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	202-800	100.0	17×ZN; 1×SF4; 1×MG; 1×W0F;
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Structure of transcribing complex 6 (TC6), the initially transcribing complex with Pol II positione…	8wap PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	202-800	100.0	17×ZN; 1×SF4; 1×MG; 1×W0F;
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Structure of transcribing complex 7 (TC7), the initially transcribing complex with Pol II positione…	8waq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	202-800	100.0	17×ZN; 1×SF4; 1×MG; 1×W0F;
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Structure of transcribing complex 8 (TC8), the initially transcribing complex with Pol II positione…	8war PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	202-800	100.0	17×ZN; 1×SF4; 1×MG; 1×W0F;
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Structure of transcribing complex 9 (TC9), the initially transcribing complex with Pol II positione…	8was PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P29083; P29084; P32780; P35269; P49848; P51948; P52655; P52657; P60899; P85421; Q00403; Q12962; Q13888; Q13889; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	202-800	100.0	17×ZN; 1×SF4; 1×MG; 1×W0F;
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TFIID-based holo PIC on SCP promoter	7egb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P24928; P29083; P29084; P32780; P35269; P49848; P50613; P51946; P51948; P52655; P52657; P60899; Q00403; Q12962; Q13888; Q13889; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	202-800	100.0	17×ZN; 1×SF4; 1×MG;
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TFIID lobe A subcomplex	7egf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P49848; Q12962; Q15543; Q15544; Q16514; Q16594; Q5VWG9;	202-799	100.0
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p53-bound TFIID-based core PIC on HDM2 promoter	7edx PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P35269; P49848; P52655; P52657; P60899; Q00403; Q12962; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	202-799	100.0	9×ZN; 1×MG;
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TFIID-based core PIC on SCP promoter	7eg7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P35269; P49848; P52655; P52657; P60899; Q00403; Q12962; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	202-799	100.0	9×ZN; 1×MG;
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TFIID-based core PIC on PUMA promoter	7eg8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P35269; P49848; P52655; P52657; P60899; Q00403; Q12962; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	202-799	100.0	9×ZN; 1×MG;
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TFIID-based intermediate PIC on SCP promoter	7eg9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P29083; P29084; P35269; P49848; P52655; P52657; P60899; Q00403; Q12962; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	202-799	100.0	10×ZN; 1×MG;
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TFIID-based intermediate PIC on PUMA promoter	7ega PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00268; P13984; P20226; P21675; P29083; P29084; P35269; P49848; P52655; P52657; P60899; Q00403; Q12962; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	202-799	100.0	10×ZN; 1×MG;
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p53-bound TFIID-based holo PIC on HDM2 promoter	7egc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A481BYI6; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; F1RKE4; I3LCB2; I3LCH3; O00268; P13984; P18074; P19447; P20226; P21675; P24928; P29083; P29084; P32780; P35269; P49848; P50613; P51946; P51948; P52655; P52657; P60899; Q00403; Q12962; Q13888; Q13889; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q6ZYL4; Q7Z7C8; Q92759;	202-799	100.0	16×ZN; 1×SF4; 1×MG;
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Crystal structure of the human TAF5-TAF6-TAF9 complex	6f3t PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P49848; Q16594;	207-800	100.0	2×CL;
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TFIID lobe B subcomplex	7egg PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P49848; Q12962; Q16514; Q16594; Q7Z7C8;	210-800	100.0
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Human TFIID BC core	6mzc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P49848; Q12962; Q16514; Q16594; Q6P1X5; Q7Z7C8;	210-796	91.54
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Human TFIID Lobe A canonical	6mzd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; P49848; Q12962; Q15543; Q15544; Q16514; Q16594; Q5VWG9;	210-796	91.54
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Human TFIID canonical state	6mzl PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; P49848; Q12962; Q15543; Q15544; Q15545; Q16514; Q16594; Q5VWG9; Q6P1X5; Q7Z7C8;	210-796	91.54
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Human TFIID bound to promoter DNA and TFIIA	6mzm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00268; P20226; P21675; P49848; P52655; P52657; Q12962; Q15545; Q16514; Q16594; Q6P1X5; Q7Z7C8;	210-796	91.54
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Structure of NTD2 domain of the human TAF5 subunit of TFIID	2nxp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	195-343	100	1×CA;
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9 SWISS-MODEL models

Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
6f3t.1.A	monomer	0.79	207-800	99.84
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8wak.1.i	monomer	0.75	202-799	100.00
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2ymu.1.A	monomer	0.67	464-796	28.13
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2ymu.1.A	monomer	0.66	465-796	28.53
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2ymu.1.A	monomer	0.64	464-797	28.66
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6zqd.1.A	monomer	0.60	464-797	19.76
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6zqc.4.A	monomer	0.59	462-797	22.02
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7ewp.1.D	monomer	0.57	502-797	21.07
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6zqd.13.A	monomer	0.56	469-796	21.04
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

9 SWISS-MODEL models built on isoform sequence

Isoform	Template	Oligo-state	QMEANDisCo	Range	Trg-Tpl Seq id (%)
Isoform 2	6f3t.1.A	monomer	0.76	207-745	93.48
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Isoform 2	8wak.1.i	monomer	0.72	202-744	95.30
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Isoform 2	2ymu.1.A	monomer	0.65	468-743	27.68
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Isoform 2	2ymu.1.A	monomer	0.64	464-743	26.91
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Isoform 2	2ymu.1.A	monomer	0.63	465-743	27.37
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Isoform 2	2ymu.1.A	monomer	0.61	465-743	27.37
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Isoform 2	6lqp.33.A	monomer	0.56	465-742	17.63
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Isoform 2	6mzl.1.F	monomer	0.54	210-741	94.63
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Isoform 2	5i2t.1.A	monomer	0.52	463-744	21.63
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Q15542 (TAF5_HUMAN) Homo sapiens (Human)

Transcription initiation factor TFIID subunit 5 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

27 Experimental Structures

9 SWISS-MODEL models

9 SWISS-MODEL models built on isoform sequence

Alignments

Background

Resolution

Transcription initiation factor TFIID subunit 5 UniProtKB InterPro STRING Interactive Modelling