Q5SHR1 | SWISS-MODEL Repository

Q5SHR1 (IF1_THET8) Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)

Translation initiation factor IF-1 UniProtKB InterPro Interactive Modelling

72 aa; Sequence (Fasta) ; 6 identical sequences: Thermus thermophilus JL-18: H9ZPM5; Thermus thermophilus: F6DEM9; Thermus parvatiensis: H7GI60; Thermus thermophilus: Q8KLI6, A0A1J1EV58, P61695

It is possible new templates exist for this target since these models were created.

Available Structures

12 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
CRYSTAL STRUCTURE OF INITIATION FACTOR IF1 BOUND TO THE 30S RIBOSOMAL SUBUNIT	1hr0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY6; P0DOY7; P0DOY9; P17291; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHQ5; Q5SIH3; Q5SJ76; Q5SJH3; Q5SLP8; Q5SLQ0;	2-72	100	65×MG; 2×ZN;
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Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex, open form (state-2…	5lmq PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY6; P0DOY7; P0DOY9; P17291; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHQ5; Q5SIH3; Q5SJ76; Q5SJH3; Q5SKU2; Q5SLP8; Q5SLQ0;	2-72	100	64×MG; 2×ZN;
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Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1B)	5lmo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY6; P0DOY7; P0DOY9; P17291; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHQ5; Q5SIH3; Q5SJ76; Q5SJH3; Q5SKU2; Q5SLP8; Q5SLQ0;	2-72	100	108×MG; 3×A; 1×G; 2×ZN; 2×U;
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Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1A)	5lmn PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY6; P0DOY7; P0DOY9; P17291; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHQ5; Q5SIH3; Q5SJ76; Q5SJH3; Q5SKU2; Q5SLP8; Q5SLQ0;	2-72	100	127×MG; 2×ZN;
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Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1C)	5lmp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY6; P0DOY7; P0DOY9; P17291; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHQ5; Q5SIH3; Q5SJ76; Q5SJH3; Q5SKU2; Q5SLP8; Q5SLQ0;	2-72	100	108×MG; 2×ZN;
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Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-2B)	5lmr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY6; P0DOY7; P0DOY9; P17291; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHQ5; Q5SIH3; Q5SJ76; Q5SJH3; Q5SKU2; Q5SLP8; Q5SLQ0;	2-72	100	2×ZN; 2×MG;
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Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-3)	5lmt PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY6; P0DOY7; P0DOY9; P17291; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHQ5; Q5SIH3; Q5SJ76; Q5SJH3; Q5SKU2; Q5SLP8; Q5SLQ0;	2-72	100	86×MG; 2×ZN;
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Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-2C)	5lms PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY6; P0DOY7; P0DOY9; P17291; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHQ5; Q5SIH3; Q5SJ76; Q5SJH3; Q5SKU2; Q5SLP8; Q5SLQ0;	2-72	100	2×ZN; 2×MG;
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Structure of bacterial 30S-IF1-IF2-IF3-mRNA-tRNA translation pre-initiation complex(state-III)	5lmv PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P0DOY6; P0DOY7; P0DOY9; P17291; P48515; P80371; P80372; P80373; P80374; P80376; P80377; P80380; Q5SHN3; Q5SHN7; Q5SHP2; Q5SHQ5; Q5SIH3; Q5SJ76; Q5SJH3; Q5SKU2; Q5SLP8; Q5SLQ0;	2-72	100	2×ZN; 2×MG; 1×FME;
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30S initiation complex	6o7k PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02358; P02359; P0A705; P0A7R5; P0A7R9; P0A7S3; P0A7S9; P0A7T3; P0A7T7; P0A7U3; P0A7U7; P0A7V0; P0A7V3; P0A7V8; P0A7W1; P0A7W7; P0A7X3; P0ADZ4; P0AG59; P0AG63; P68679;	2-72	100
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Structure of the 30S Pre-Initiation Complex 1 (30S IC-1) Stalled by GE81112	5me0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02358; P02359; P03000; P0A705; P0A707; P0A7R5; P0A7R9; P0A7S3; P0A7S9; P0A7T7; P0A7U3; P0A7U7; P0A7V0; P0A7V3; P0A7V8; P0A7W1; P0A7W7; P0A7X3; P0ADZ4; P0AG59; P0AG63; P68679;	2-72	100	1×FME;
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Structure of the 30S Pre-Initiation Complex 2 (30S IC-2) Stalled by GE81112	5me1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P02358; P02359; P03000; P0A705; P0A707; P0A7R5; P0A7R9; P0A7S3; P0A7S9; P0A7T7; P0A7U3; P0A7U7; P0A7V0; P0A7V3; P0A7V8; P0A7W1; P0A7W7; P0A7X3; P0ADZ4; P0AG59; P0AG63; P68679;	2-72	100	1×FME;
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	5lmr.1.V	monomer	0.82	2-72		100.00
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

Q5SHR1 (IF1_THET8) Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)

Translation initiation factor IF-1 UniProtKBInterProInteractive Modelling

Available Structures

12 Experimental Structures

1 SWISS-MODEL model

Alignments

Background

Resolution

Translation initiation factor IF-1 UniProtKB InterPro Interactive Modelling