Q6QIY3 (SCNAA_MOUSE) Mus musculus (Mouse)

Sodium channel protein type 10 subunit alpha UniProtKBInterProSTRINGInteractive Modelling

1958 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; )

Sequence Features

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 126-149Helical; Name=S1 of repeat I
 155-174Helical; Name=S2 of repeat I
 188-206Helical; Name=S3 of repeat I
 213-232Helical; Voltage-sensor; Name=S4 of repeat I
 249-272Helical; Name=S5 of repeat I
 341-365Pore-forming
 373-398Helical; Name=S6 of repeat I
 659-683Helical; Name=S1 of repeat II
 695-718Helical; Name=S2 of repeat II
 727-746Helical; Name=S3 of repeat II
 753-772Helical; Voltage-sensor; Name=S4 of repeat II
 789-809Helical; Name=S5 of repeat II
 834-854Pore-forming
 864-889Helical; Name=S6 of repeat II
 1149-1172Helical; Name=S1 of repeat III
 1186-1211Helical; Name=S2 of repeat III
 1218-1239Helical; Name=S3 of repeat III
 1244-1265Helical; Voltage-sensor; Name=S4 of repeat III
 1285-1312Helical; Name=S5 of repeat III
 1355-1376Pore-forming
 1393-1419Helical; Name=S6 of repeat III
 1473-1496Helical; Name=S1 of repeat IV
 1508-1531Helical; Name=S2 of repeat IV
 1538-1561Helical; Name=S3 of repeat IV
 1574-1595Helical; Voltage-sensor; Name=S4 of repeat IV
 1611-1633Helical; Name=S5 of repeat IV
 1648-1670Pore-forming
 1699-1723Helical; Name=S6 of repeat IV
 276-318
 856-865
 129-405Ion transport domain
IPR005821PF00520
 665-893Ion transport domain
IPR005821PF00520
 903-1148Sodium ion transport-associated
IPR010526PF06512
 1152-1428Ion transport domain
IPR005821PF00520
 1477-1733Ion transport domain
IPR005821PF00520

Sequence Alignments

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -4.76 5vb2.1.A1466-1753
25.61
Assess

Homology models built on isoform sequence

IsoformOligo-stateLigandsQMEANTemplateRangeSeq id (%)
Isoform 3monomer-3.816uz0.1.A1-294
83.17
Assess
Isoform 3monomer-4.896a95.1.A1-403
41.51
Assess