Q6RI86 (TRPA1_RAT) Rattus norvegicus (Rat)
Transient receptor potential cation channel subfamily A member 1 UniProtKBInterProSTRINGInteractive Modelling
1125 aa; Sequence (Fasta)
It is possible new templates exist for this target since these models were created.
Sequence Features
| 623 | Key residue for activation by the scorpion wasabi receptor toxin | ||
| 635 | Important residue for activation by the scorpion wasabi receptor toxin | ||
| 647 | Important residue for activation by the scorpion wasabi receptor toxin | ||
| 722-742 | Helical; Name=1 | ||
| 768-788 | Helical; Name=2 | ||
| 807-827 | Helical; Name=3 | ||
| 833-853 | Helical;Name=4 | ||
| 877-897 | Helical; Name=5 | ||
| 905-925 | Pore-forming | ||
| 938-959 | Helical; Name=6 | ||
| 193-666 | Alternate | ||
| 463-666 | Alternate | ||
| 609-622 | Alternate | ||
| 622-666 | Alternate | ||
| 634-859 | Alternate; transient; in hyperoxia; unknown whether inter- or intrachain | ||
| 63-129 | Ankyrin repeat-containing domain IPR020683PF12796 | ||
| 136-222 | Ankyrin repeat-containing domain IPR020683PF12796 | ||
| 244-340 | Ankyrin repeat-containing domain IPR020683PF12796 | ||
| 419-507 | Ankyrin repeat-containing domain IPR020683PF12796 | ||
| 777-974 | Ion transport domain IPR005821PF00520 |
Sequence Alignments
Homology models
| Oligo-state | QMEAN | Template | Range | Seq id (%) | Ligands |
|---|---|---|---|---|---|
| homo-4-mer | -2.66 | 6v9v.1.A | 80.25 | 4×CA; | |
| Assess | |||||
| monomer | -2.62 | 5le7.2.A | 30.97 | ||
| Assess | |||||
| monomer | -2.07 | 6f5e.1.A | 33.58 | ||
| Assess | |||||
| monomer | -2.14 | 5le2.1.A | 33.24 | ||
| Assess | |||||
| monomer | -2.27 | 5le2.1.A | 31.76 | ||
| Assess | |||||
| monomer | -3.16 | 5y4f.2.A | 29.57 | ||
| Assess | |||||
| monomer | -3.90 | 3zkj.1.A | 28.57 | ||
| Assess | |||||
| monomer | -4.61 | 6len.1.A | 20.20 | ||
| Assess | |||||