Q6YLW2 | SWISS-MODEL Repository

Triticum turgidum subsp. paleocolchicum: A0A2Z6BY07 ; Triticum zhukovskyi: A0A6G5NTN9 ; Triticum macha: A0A0A8IBX5 ; Secale strictum: A0A218LTA5 ; Aegilops speltoides var. ligustica: A0A075VZI1 ; Aegilops sharonensis: A0A075W341 ; Triticum monococcum subsp. aegilopoides: S4Z2X9 ; Amblyopyrum muticum: Q7GED2 ; Aegilops speltoides: P92892 ; S4SDN2 ; Triticum urartu: S4Z979 ; Triticum turgidum: A0A075VV93 ; Triticum timopheevii: A0A075VWG2 ; Triticum monococcum: Q7GED1 ; Triticum turgidum subsp. durum: A0A097PDL7 ; Triticum aestivum: P12073 ; S4Z0D7 ; Secale montanum: Q6YLW3 ; Secale cereale: S4Z014 ; Aegilops markgrafii: Q6YLW9 ; Aegilops columnaris: A0A1Z3MJ28 ; Aegilops umbellulata: A0A218LEE9 ; Aegilops searsii: A0A075W1Z2 ; Aegilops longissima: A0A075W6L9 ; Aegilops comosa: Q7GED9 ; A0A6G5NRT2 ; Aegilops bicornis: A0A075W1R8 ; Triticum monococcum subsp. monococcum: A0A0A8IBL6 ; Aegilops triuncialis: A0A218LDJ4 ; Taeniatherum caput-medusae subsp. caput-medusae: A0A3G6IKS9 ; Taeniatherum caput-medusae: Q7GED0 ; A0A218LU78 ; Crithopsis delileana: A0A3G6IK08 ; Triticum aestivum subsp. tibeticum: A0A2I4R1U5 ; Triticum carthlicum var. rubiginosum: A0A2Z6C7H1 ; Triticum aestivum var. ferrugineum: A0A2Z6C834 ; Triticum macha var. palaeoimereticum: A0A2Z6BYU6 ; Triticum macha var. colchicum: A0A2Z6BYJ8 ; Triticum carthlicum var. fuliginosum: A0A2Z6BY84 ; Triticum macha var. megrelicum: A0A2Z6AR77 ; Aegilops speltoides var. speltoides: A0A075W4Q5 ; Aegilops neglecta: A0A218LAK5 ; Aegilops kotschyi: A0A075W193 ; Aegilops biuncialis: A0A218L658

It is possible new templates exist for this target since these models were created.

		36-225	DNA-directed RNA polymerase, RpoA/D/Rpb3-type IPR011263 PF01193
		70-159	DNA-directed RNA polymerase, insert domain IPR011262 PF01000
		267-325	RNA polymerase, alpha subunit, C-terminal IPR011260 PF03118

Homology models

Oligo-state	QMEAN	Template	Range	Seq id (%)
homo-2-mer	-2.25	4noi.1.A	36-233	28.83
Assess
monomer	-0.67	6ccv.1.K	274-312	33.08
Assess

Q6YLW2 (RPOA_SECCE) Secale cereale (Rye)

DNA-directed RNA polymerase subunit alpha UniProtKB InterPro Interactive Modelling

Homology Model

Homology models

Q6YLW2 (RPOA_SECCE) Secale cereale (Rye)

DNA-directed RNA polymerase subunit alpha UniProtKBInterProInteractive Modelling

Homology Model

Model Quality Estimate

Sequence Features

Sequence Alignments

Homology models

Background

Resolution

DNA-directed RNA polymerase subunit alpha UniProtKB InterPro Interactive Modelling