Q709C8 (VP13C_HUMAN) Homo sapiens (Human)
Vacuolar protein sorting-associated protein 13C UniProtKBInterProSTRINGInteractive Modelling
3753 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; )
Sequence Features
153 | R -> H (in dbSNP:rs12595158) VAR_029548 dbSNP | ||
974 | R -> K (in dbSNP:rs3784634) VAR_029549 dbSNP | ||
1132 | I -> V (in dbSNP:rs3784635) VAR_029550 dbSNP | ||
1302 | Y -> C (in dbSNP:rs2303405) VAR_029551 dbSNP | ||
1389 | G -> R (in PARK23; dbSNP:rs369100678) VAR_076363 dbSNP | ||
1485 | T -> A (in dbSNP:rs8026956) VAR_029552 dbSNP | ||
1495 | I -> V (in dbSNP:rs11629598) VAR_029553 dbSNP | ||
1592 | S -> Y (in dbSNP:rs11629838) VAR_029554 dbSNP | ||
2322 | V -> M (in dbSNP:rs12907567) VAR_029555 dbSNP | ||
2808 | K -> R (in dbSNP:rs34060567) VAR_053808 dbSNP | ||
2872 | C -> F VAR_074191 | ||
2913 | S -> N (in dbSNP:rs10851704) VAR_029556 dbSNP | ||
3-116 | Vacuolar protein sorting-associated protein 13-like, N-terminal domain IPR026854PF12624 | ||
182-413 | Vacuolar protein sorting-associated protein 13, second N-terminal domain IPR031646PF16908 | ||
612-833 | VPS13, repeated coiled region IPR031642PF16910 | ||
1176-1368 | VPS13, repeated coiled region IPR031642PF16910 | ||
1691-1882 | VPS13, repeated coiled region IPR031642PF16910 | ||
2766-3016 | Vacuolar protein sorting-associated protein 13, SHR-binding domain IPR009543PF06650 | ||
3324-3500 | Vacuolar protein sorting-associated protein 13, C-terminal IPR031645PF16909 | ||
3506-3586 | Autophagy-related, C-terminal IPR015412PF09333 |
Sequence Alignments
Homology models
Oligo-state | QMEAN | Template | Range | Seq id (%) | Ligands |
---|---|---|---|---|---|
homo-2-mer | -3.85 | 6cbc.1.A | 30.56 | ||
Assess | |||||
monomer | -0.45 | 2a90.1.A | 31.25 | ||
Assess |
Homology models built on isoform sequence
Isoform | Oligo-state | Ligands | QMEAN | Template | Range | Seq id (%) |
---|---|---|---|---|---|---|
Isoform 2 | homo-2-mer | -3.81 | 6cbc.1.A | 30.56 | ||
Assess | ||||||
Isoform 2 | monomer | -0.45 | 2a90.1.A | 31.25 | ||
Assess | ||||||
Isoform 3 | homo-2-mer | -3.36 | 6cbc.1.A | 30.65 | ||
Assess | ||||||
Isoform 4 | homo-2-mer | -3.36 | 6cbc.1.A | 30.65 | ||
Assess | ||||||
Isoform 4 | monomer | -0.45 | 2a90.1.A | 31.25 | ||
Assess |