Q709C8 (VP13C_HUMAN) Homo sapiens (Human)

Vacuolar protein sorting-associated protein 13C UniProtKBInterProSTRINGInteractive Modelling

3753 aa; Sequence (Fasta) ; (Isoform 2; Isoform 3; Isoform 4; )

Sequence Features

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 153R -> H (in dbSNP:rs12595158) VAR_029548 dbSNP
 974R -> K (in dbSNP:rs3784634) VAR_029549 dbSNP
 1132I -> V (in dbSNP:rs3784635) VAR_029550 dbSNP
 1302Y -> C (in dbSNP:rs2303405) VAR_029551 dbSNP
 1389G -> R (in PARK23; dbSNP:rs369100678) VAR_076363 dbSNP
 1485T -> A (in dbSNP:rs8026956) VAR_029552 dbSNP
 1495I -> V (in dbSNP:rs11629598) VAR_029553 dbSNP
 1592S -> Y (in dbSNP:rs11629838) VAR_029554 dbSNP
 2322V -> M (in dbSNP:rs12907567) VAR_029555 dbSNP
 2808K -> R (in dbSNP:rs34060567) VAR_053808 dbSNP
 2872C -> F VAR_074191
 2913S -> N (in dbSNP:rs10851704) VAR_029556 dbSNP
 3-116Vacuolar protein sorting-associated protein 13-like, N-terminal domain
IPR026854PF12624
 182-413Vacuolar protein sorting-associated protein 13, second N-terminal domain
IPR031646PF16908
 612-833VPS13, repeated coiled region
IPR031642PF16910
 1176-1368VPS13, repeated coiled region
IPR031642PF16910
 1691-1882VPS13, repeated coiled region
IPR031642PF16910
 2766-3016Vacuolar protein sorting-associated protein 13, SHR-binding domain
IPR009543PF06650
 3324-3500Vacuolar protein sorting-associated protein 13, C-terminal
IPR031645PF16909
 3506-3586Autophagy-related, C-terminal
IPR015412PF09333

Sequence Alignments

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
homo-2-mer -3.85 6cbc.1.A3-364
30.56
Assess
monomer -0.45 2a90.1.A3114-3145
31.25
Assess

Homology models built on isoform sequence

IsoformOligo-stateLigandsQMEANTemplateRangeSeq id (%)
Isoform 2homo-2-mer-3.816cbc.1.A3-364
30.56
Assess
Isoform 2monomer-0.452a90.1.A3114-3145
31.25
Assess
Isoform 3homo-2-mer-3.366cbc.1.A3-321
30.65
Assess
Isoform 4homo-2-mer-3.366cbc.1.A3-321
30.65
Assess
Isoform 4monomer-0.452a90.1.A3071-3102
31.25
Assess